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SCNpilot_expt_1000_bf_scaffold_1211_curated

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Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1211_curated_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1083)
DNA (1083bp) protein (361aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Vitamin-B12 independent methionine synthase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQN8_9BRAD
Vitamin-B12 independent methionine synthase {ECO:0000313|EMBL:EGP06515.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_1211_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1099..2085)
DNA (987bp) protein (329aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
purU; formyltetrahydrofolate deformylase PurU (EC:3.5.1.10); K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate deformylase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDL6_9BRAD
SCNpilot_expt_1000_bf_scaffold_1211_curated_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2219..3061
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBG1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35678.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1211_curated_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3157..4374
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQP6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06523.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_expt_1000_bf_scaffold_1211_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4486..5754
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA11_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36440.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_expt_1000_bf_scaffold_1211_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5889..6341)
DNA (453bp) protein (151aa)
Secondary thiamine-phosphate synthase enzyme n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4M5_9BRAD
Secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EKS36441.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cell division protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6420..6695
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FDF4A0
Uncharacterized protein {ECO:0000313|EMBL:EKS36443.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1211_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6708..7139)
DNA (432bp) protein (144aa)
calpastatin n=1 Tax=Afipia birgiae RepID=UPI0002D6225D
Uncharacterized protein {ECO:0000313|EMBL:EKS36442.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7232..7588)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NZC4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35682.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7897..9129
DNA (1233bp) protein (411aa)
Branched-chain amino acid ABC transporter, amino acid-binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQX6_9BRAD
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EGP06343.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter periplasmic branched chain amino acid binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9341..10288
DNA (948bp) protein (316aa)
High-affinity branched-chain amino acid transport system permease protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQX7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35685.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10285..11583
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2J8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35686.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..12341
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDM3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36448.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12341..13036
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6S1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36449.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13083..14009
DNA (927bp) protein (309aa)
cation diffusion facilitator family transporter n=1 Tax=Afipia birgiae RepID=UPI0002E7FEF7
Uncharacterized protein {ECO:0000313|EMBL:EKS36450.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative Cation diffusion facilitator family transporter
SCNpilot_expt_1000_bf_scaffold_1211_curated_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14244..15128)
DNA (885bp) protein (295aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQY1_9BRAD
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EGP06348.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
putative NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_1211_curated_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15226..16065
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P7S6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35690.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative DNA-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16233..16907)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4N4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36451.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1211_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17165..17986
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P1H7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36452.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17983..19884
DNA (1902bp) protein (634aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDM7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36453.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1211_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20015..20908
DNA (894bp) protein (298aa)
ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002FC21D2
Uncharacterized protein {ECO:0000313|EMBL:EKS36454.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1211_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21091..22161
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4N9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36456.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_23
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22218..23501
DNA (1284bp) protein (428aa)
ABC transporter substrate-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QQY8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35696.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
branched chain amino-acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_24
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23661..24500
DNA (840bp) protein (280aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002D51D84
Uncharacterized protein {ECO:0000313|EMBL:EKS35697.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_25
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24604..25836
DNA (1233bp) protein (411aa)
Phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:EGP06357.1}; EC=6.2.1.30 {ECO:0000313|EMBL:EGP06357.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
putative phenylacetate-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase n=2 Tax=Bradyrhizobiaceae RepID=F7QQZ0_9BRAD
SCNpilot_expt_1000_bf_scaffold_1211_curated_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25882..27087
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA29_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36460.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_expt_1000_bf_scaffold_1211_curated_27
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27151..28431)
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQZ3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06360.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_28
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28689..28979
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZE8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35702.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1211_curated_29
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28892..30295)
DNA (1404bp) protein (468aa)
Indoleacetamide hydrolase {ECO:0000313|EMBL:EGP06361.1}; EC=3.5.1.- {ECO:0000313|EMBL:EGP06361.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
amidase; K01426 amidase [EC:3.5.1.4]
Indoleacetamide hydrolase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQZ4_9BRAD
SCNpilot_expt_1000_bf_scaffold_1211_curated_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30460..30822
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D824DC
Uncharacterized protein {ECO:0000313|EMBL:EKS36464.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 1-30 of 91 in total

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