ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1979_curated_1

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 3..422

Top 3 Functional Annotations

Value Algorithm Source
cupin n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003739754 similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 134.0
  • Bit_score: 225
  • Evalue 4.40e-56
Cupin {ECO:0000313|EMBL:KJC50438.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 136.0
  • Bit_score: 230
  • Evalue 1.10e-57
cupin similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 136.0
  • Bit_score: 221
  • Evalue 2.00e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GATGATCGTCACGCCTCGACCGGCATCTTCGACATTCCCGCCATCGCGAAATCGCTGCCGGACACCGCAAAGACCCTGCTGGTCGACAAATATCTGACCGATCGCGAGCAGGCGAGCGCACGCGTGTTCCGCGTGTACCGGCCGACTCCGCCGCATTATCACGCGACCTGCGACGAGTATCTGTATGTCGTATCGGGCCGGGGCACCTTCTGGATGAAGGATGCGGCGACCAAGGCGGAGTTCGGTCCCGGGCAGCTGCTGTTTTTCGAGCGCAACACCGTGCATGCGATGCCGGAACTCTATGAAGAGCCGGTGGTGTTTTTGTCGATCGATACGCCGCGGCGCAATCCGACCGACATCATCTTCGTGGACCCGAACGACGGCTCGCCCGCGACCTTCATGGCGCGCAACGCGGAGTAG
PROTEIN sequence
Length: 140
DDRHASTGIFDIPAIAKSLPDTAKTLLVDKYLTDREQASARVFRVYRPTPPHYHATCDEYLYVVSGRGTFWMKDAATKAEFGPGQLLFFERNTVHAMPELYEEPVVFLSIDTPRRNPTDIIFVDPNDGSPATFMARNAE*