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SCNpilot_expt_1000_bf_scaffold_1979_curated_5

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 4617..6578

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7B0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 647.0
  • Bit_score: 973
  • Evalue 1.00e-280
PAS domain S-box protein {ECO:0000313|EMBL:EKS37371.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 647.0
  • Bit_score: 973
  • Evalue 1.40e-280
PAS/PAC sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 634.0
  • Bit_score: 829
  • Evalue 7.60e-238

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1962
ATGGCTGACATCACCGCGTTACACACGGACGGAGCTTTCGATGCGTCGCTGCCGTCGGCGGATGAGCGCTATCAGTTGCTGATCGATGCGATCAGTGATTACGCCATCTACATGCTCGATCCCGACGGGATCGTGACAAGCTGGAATTCCGGCGCACGGCGGGTCAAAGGCTACGCGGCGCCGGAAATCGTCGGAAGCCACTTCTCGAAATTTTATACCGAGGACGACCGGCGCGCGGGCCTTCCCGGGCGCGCGCTGAAGGCCGCCGAGACCGAAGGCAAGTTCGAGAGCGAAGGCTGGCGCGTGCGCAAGGACGGCAGCCGGTTCTGGGCGCATGTGGTGATCGATCCGATCCGCTCGCCGGACGGGCAGTTGATCGGCTTCGCCGAGATCACCTGGGACCTCACTGAGCGCCGCACGGCCGAAGAGCGGCTGCGGCAAAACGAAGAGCAGTTCCGGCTGCTGGTGCAGGGCGTCACCGACTACGCGATCTACATGCTCGATCCTGACGGGCACGTCATCAGCTGGAATCAGGGCGCCGAACGCATCAAGGGGTATCGCGCCGATGAAATCATCGGCCAGCACTTTTCAAAATTTTACACGGCGGGCGATCGGGAAAAAGGCGATCCGCAGACCGCGCTCGAAACCGCGCGGCGCGAAGGCCGGTTCGAGAAGGAAGCCCTGCGCGTGCGCAAGGACGGCACGCAATTCTGGGCGCATGTCATCATCGATCCGATCCGCGATGATGCCGGAGCCATCATCGGCTTCGCCAAGGTGACGCGCGACATCACCGAGCGCATGGAAACCCAGAAGGCGCTCGAACAGACCCGCGAAGCGCTCGCCCATTCGCAGAAGATGGATGCGATCGGCCAGCTCAGCGGCGGCATCGCGCACGACTTCAACAATCTGCTGACGGTCATTCTCGGCAGTCTCGAACTGGCCGGGCGGAGGCTGTCGGACAGCGACCCGCGCGTCACGGGACTGATCGCCAACGCGATGCAGGCCGCCCAGCGCGGCGCGGCCCTGACCCAGCGCATGCTGGCCTTCGCCCGGCGTCAGGATCTGGACCTCAAGGCCGTCGATGTGTCGGACCTCGTGCGCGGCATGACCGATCTGCTGCAGAGCTCGCTGGGCCCATCGATGTCCATTGAGACTCATTTTCCGATCAAGCTCAATCCTGTTCATGCTGACGCCAATCAGCTCGAAATGGCGCTGCTGAATCTCGCGGTGAATGCGCGCGACGCGATGCCGGACGGCGGCCGCATCATCATCGCGGCACGCGAGGAAACCGTTGCGCCTGCGCAGCCGGCCGGCAAGCTGAAGGCCGGACGTTATGTCTGCCTGTCGGTGCAGGACACCGGCGAGGGTATGGACAAGGCGACGCTGACACGGGCGATGGAGCCGTTCTTCACCACCAAGGGCGTGGGGCGCGGAACAGGATTGGGATTATCGATGGTTCACGGCATGACGGAGCAGTCCGGCGGACAGTTTGTGCTCAAGAGCCGCAAGGGCGCGGGGACGACGGCAGAAATCTGGCTGCCGGTGCCGGCGCCTGCCAGGAAAGCCGCCGACAGCGACGTCGTTATCAAAAGCGTCGAGCCGCCGATGCGTCCGCTCACCGTGCTCGCGGTCGACGACGACGGCCTTGTGCTGATGAACACGTCGCTGATGCTGCAGGACATGGGGCACCTCGTACTCGAGGCGGCGTCGGGACAGCACGCGCTCGACATTCTGCGGCAACAGGCGACCATCGATCTCGTGATCACCGATCACGCCATGCCGAAAATGACCGGCGCTCAGCTGGCCGAAGCGATCAGGGTGGAGCGGCCCGGCATTCCGGTCATTCTCGCGACCGGTTATGCGGAGCTGCCGTCCGGCGTCGGAGCCGGCCTGTTGAAACTCAGCAAGCCGTTCCGCCAGCAGGAATTGATGCAGGCGGTGGCGTCCGCCGTGCCCGTATAG
PROTEIN sequence
Length: 654
MADITALHTDGAFDASLPSADERYQLLIDAISDYAIYMLDPDGIVTSWNSGARRVKGYAAPEIVGSHFSKFYTEDDRRAGLPGRALKAAETEGKFESEGWRVRKDGSRFWAHVVIDPIRSPDGQLIGFAEITWDLTERRTAEERLRQNEEQFRLLVQGVTDYAIYMLDPDGHVISWNQGAERIKGYRADEIIGQHFSKFYTAGDREKGDPQTALETARREGRFEKEALRVRKDGTQFWAHVIIDPIRDDAGAIIGFAKVTRDITERMETQKALEQTREALAHSQKMDAIGQLSGGIAHDFNNLLTVILGSLELAGRRLSDSDPRVTGLIANAMQAAQRGAALTQRMLAFARRQDLDLKAVDVSDLVRGMTDLLQSSLGPSMSIETHFPIKLNPVHADANQLEMALLNLAVNARDAMPDGGRIIIAAREETVAPAQPAGKLKAGRYVCLSVQDTGEGMDKATLTRAMEPFFTTKGVGRGTGLGLSMVHGMTEQSGGQFVLKSRKGAGTTAEIWLPVPAPARKAADSDVVIKSVEPPMRPLTVLAVDDDGLVLMNTSLMLQDMGHLVLEAASGQHALDILRQQATIDLVITDHAMPKMTGAQLAEAIRVERPGIPVILATGYAELPSGVGAGLLKLSKPFRQQELMQAVASAVPV*