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SCNpilot_expt_1000_bf_scaffold_1979_curated_7

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(7380..9014)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002DCC198 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 534.0
  • Bit_score: 842
  • Evalue 2.30e-241
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS37365.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 533.0
  • Bit_score: 829
  • Evalue 2.80e-237
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 536.0
  • Bit_score: 646
  • Evalue 9.90e-183
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1635
GTGGATTACATGAATCCCGCGGCCGAGAAATTGATCGCATGCCGCCTGCATGACGCGCGCGGACGGCCGCTCGCTTCGCTGTTCGAGATTCTGGATGAAGACACCGGGCATCCGGTCGAGGGGCAGATTCCGCGCATCCTGCAAGGCGAGCATCTGCCTGCCCCCACCCGCCCGCATCTGCTCCAGCGCCATGACTCCACCTCGGTGCCGGTCTCCATCGTGGGAGCGCCGCTTCACAAGGAAGGCGCGCTTGCCGGCGCGGTGGTCGTGCTGCACCATATGACCCGCGAGAAGAAATACATCGCCCGCCTGTCATGGCAGGCCTCGCATGACAGCCTGACCAAGCTCGCCAACCGCCGCGAGTTCGAGCACAGGCTGGAGCGCGCGTTGCATCAACTCGGCACCGGTCAGGATAAGTCGCACGGCCTAATGTATGTGGATCTCGACCAGTTCAAGATCATCAACGACACCTGCGGCCACGCCGCCGGCGACAAGCTGCTGTGCGAAGTGGCTTTGGCACTTCAGCGGCATATCCGCAACGAGGATCTGCTCGCGCGCCTCGGCGGCGATGAATTCGCCATCCTGCTGGAAAACGGCGATCTCGATCAGGCCGCCATTCTTGCGGAGCGGCTGCGGCAGACCGTGGAAGACATGAACTTTGTCTGGGATGGCCGGACCTTTACAGTCACCGCAAGCATCGGCCTCGTGCAGATGAAGCGGGAGCATGCCACCCAGGACGAGATCCTGCGCACCGCGGATCTCGCCTGTTACATGGCCAAGGAAAAGGGCCGCAACCGCGTCCAGATTCACAACCCCACCGATACCGAACTGCAGAACCGGTTCGGCGAAATGGCCTGGGTTCAGCGAATCCACGATGCACTGGACGAGGAGCGTTTCTGCCTGTTCGCCCAGAAGATCGCGCCCCTGCAGAACGCTGGTCATTGCGGCATGCATATCGAACTTCTGCTGCGGTTGCGCGATCGCGACGACAAGCTGGTGCCCCCGATCGATTTCATTCCCGCCGCGGAGCGTTATGGCCTGATGCCGCTGATCGATCACTGGGTGGTCGGCCATGCTTTCAAGATTCTCGCAAGCCGTTTGAAAAACGCGCCGCACGAACCGATCGCGACCTGCGCCATCAACCTGTCGGGCGCGACCTTCGGCGATGACGGCTTCATCGACCATGTCCGCGAACAGCTCGCCCTCCACGACATTCCGCCGACCATGATCTGCTTCGAGGTCACGGAAACCAGCGCGATCGCCAATATCGAAAACGCCAGCCGTTTCATTGACGTTCTGCAGGCGCTGGGATGCCGCTTCTCGCTCGACGATTTCGGCAGCGGCATGTCGTCGTTCGGCTATCTGAAGCATCTGCCAGTCGATTACCTGAAAATCGACGGCGGCTTCGTCAAGGACATGCTCGACGATCCGATCGACCGCGCCATGGTGGAAATGATCTGCCGCATCGGCAAGGTGATGGGCAAAAGCACCGTCGCCGAGTTTGTTGAGAATGACGCCATTCTCGACGCCGTGCGCGAGATCGGCGTCGATTATGCGCAAGGCTATGGCGTCGGGCGTCCGGAGCCGTTCGAGATGGCGGACATCGAAACCGACGCCCGGCTGTGCGTGGCGTAG
PROTEIN sequence
Length: 545
VDYMNPAAEKLIACRLHDARGRPLASLFEILDEDTGHPVEGQIPRILQGEHLPAPTRPHLLQRHDSTSVPVSIVGAPLHKEGALAGAVVVLHHMTREKKYIARLSWQASHDSLTKLANRREFEHRLERALHQLGTGQDKSHGLMYVDLDQFKIINDTCGHAAGDKLLCEVALALQRHIRNEDLLARLGGDEFAILLENGDLDQAAILAERLRQTVEDMNFVWDGRTFTVTASIGLVQMKREHATQDEILRTADLACYMAKEKGRNRVQIHNPTDTELQNRFGEMAWVQRIHDALDEERFCLFAQKIAPLQNAGHCGMHIELLLRLRDRDDKLVPPIDFIPAAERYGLMPLIDHWVVGHAFKILASRLKNAPHEPIATCAINLSGATFGDDGFIDHVREQLALHDIPPTMICFEVTETSAIANIENASRFIDVLQALGCRFSLDDFGSGMSSFGYLKHLPVDYLKIDGGFVKDMLDDPIDRAMVEMICRIGKVMGKSTVAEFVENDAILDAVREIGVDYAQGYGVGRPEPFEMADIETDARLCVA*