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SCNpilot_expt_1000_bf_scaffold_6410_curated_4

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 2479..3075

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKU4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 198.0
  • Bit_score: 352
  • Evalue 2.00e-94
Uncharacterized protein {ECO:0000313|EMBL:EKS42201.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 198.0
  • Bit_score: 352
  • Evalue 2.80e-94
TRAP transport system, small permease similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 196.0
  • Bit_score: 317
  • Evalue 3.80e-84

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
TTGCAATCGCTACTGAAAGTAAGCCGCGCAATCGACGCGTTCAGCACGTTCGTCGGTCGCTGGATATCATGGCTGATCGTGGTCGCAGTCATCATCTCGGCCGTAAACGCCGTCGTCCGGAAAGTCTTCGACGTGTCGTCGAACTCCTTTCTTGAACTGCAGTGGGTTCTTTTCAGCGTCGTATTTCTGCTGTGCGCGCCCTGGACGCTTCTGAAGGGCGAGCATATCAGGATTGACATCATCAATCACTTGTTCCCGCTCCGCGTCCGCGGCTGGATCGATATGATCGGTCACGTATTTTTTCTTGTGCCGTTCTGCGTCATCCTGATCTGGACTTCGATCCCGTTCTTTCTCGTTTCCTATCACCAGAACGAACAGTCCTTCAGCGCCGGGGGCCTGCCGCAGTGGCCGGCGAAAGGGCTGATCATGATCGGCCTCGCGCTGCTGCTGATCCAGGCGATTTCGGAAATCATCAAGCGCGCCGCCATCATGCAGGGCCTCCTGCCCGATCCGAACGCCGAAGCCCTCAGCGCGCATGAAATGGCCGAGCTTGAGGCCGTTAGACTGGCGCAAGCCATCACCACCGACAAACCATGA
PROTEIN sequence
Length: 199
LQSLLKVSRAIDAFSTFVGRWISWLIVVAVIISAVNAVVRKVFDVSSNSFLELQWVLFSVVFLLCAPWTLLKGEHIRIDIINHLFPLRVRGWIDMIGHVFFLVPFCVILIWTSIPFFLVSYHQNEQSFSAGGLPQWPAKGLIMIGLALLLIQAISEIIKRAAIMQGLLPDPNAEALSAHEMAELEAVRLAQAITTDKP*