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SCNpilot_expt_1000_bf_scaffold_1189_curated_16

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 18750..19265

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 172.0
  • Bit_score: 340
  • Evalue 3.70e-91
Multimodular transpeptidase-transglycosylase n=2 Tax=Bradyrhizobiaceae RepID=F7QN18_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 356
  • Evalue 2.00e-95
1A family penicillin-binding protein {ECO:0000313|EMBL:EKS40092.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 172.0
  • Bit_score: 356
  • Evalue 2.90e-95

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGATAACGGCTACACGCCGTCGACCGTGGTCGTGGACGCGCCGATTGAAATCGATCAGGGGCAGGGCGTCGGCGTCTGGCGGCCGGAGAACTATTCGACCGGCAAGTATTACGGCCCGACCACGCTGCGCAACGCGCTGATCCGTTCGCTCAACACCGTCACCGTTCGTCTCGCGCAGGATGTCGGCATGCCGCTGATCGGCGAATACGCCAAGCGTTTCGGCGTCTATGACGAATTGCCGAACTATCTGTCCTACGCACTTGGCGCGGGCGAGACGACCGTGATGCGCATGGTCACCGCCTATTCGATGTTCGCCAATGGCGGCAAGCGCGTGAAGCCGACGCTGATCGACCGCATTCAGGATCGTTACGGCCACACCATTTTCAGGCACGACCAGCGCGAATGCCGCGGCTGCGATGCGCCTGACGGCTGGAAGAACCAGCCCGAGCCGACGCTGGTGGATCGCCGCGAGCAAGTGCTGGATTCGATGACGGCCTACCAGATCACATCGATG
PROTEIN sequence
Length: 172
MDNGYTPSTVVVDAPIEIDQGQGVGVWRPENYSTGKYYGPTTLRNALIRSLNTVTVRLAQDVGMPLIGEYAKRFGVYDELPNYLSYALGAGETTVMRMVTAYSMFANGGKRVKPTLIDRIQDRYGHTIFRHDQRECRGCDAPDGWKNQPEPTLVDRREQVLDSMTAYQITSM