ggKbase home page

SCNpilot_expt_1000_bf_scaffold_904_curated_29

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(27843..29519)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G3F2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 557.0
  • Bit_score: 605
  • Evalue 4.80e-170
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:EDT09473.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 557.0
  • Bit_score: 605
  • Evalue 6.80e-170
thiamine pyrophosphate protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 545.0
  • Bit_score: 589
  • Evalue 1.10e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia graminis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGAACAAGCATCAATCGGCGCAGGCCGTGACCGGAGAAGCCGGCTTGCGCAATGGCGGGCAAATTCTGGTGTCTGCGTTGCGGCGCAATGGAGCCGATCGCATGTTCGGCGTGCCTGGTGAAAGCGCACTGCCGATTTTCGACGCTGTTTATGAGCCTGATGCTGGTGTCCGGTTCATTATGTGCCGGCACGAGGCGACGGCGTCCCACATGGCGGAGGCTGACGGTAAGCTCTCCAAGCGGCCCGGTATTTGCGTGGTAAGCCGTGGCCCAGGCGCGATGCAGGCGGCGATAGGTTTACATACGGCATGGCAGGATTCCACGCCGATGATCTTGATTGTCGGCCAGGTGCCGCGCAGCCATCGCGGCCGCGAAGCCTTTCAGGAAATGGATTATAGCCGGACGTTCGATGATATGACGAAGTGGGCGGTGGAGATCGACTCCGTCGATCGCATTCCCGAGATTGTCAGCCGTGCTTTCCATGTCGCGATGCAGGGGCGCCCGGGACCAGTGGTCTTGTCGATACCCGAAGACGTGCTGAGCGCGACAAGCAGTGTCGCCGATGCTGCGCCGGCGACGACCATTGATGCCGCGCCGTCGGCCCAACAGATGGCCGATGTACGTCGGCTTCTGCAGCAGGCGCAGCGTCCATTGGTTATTGTTGGGAATCTCGGTTGGAATGTAGAGGCGGCTTCCAGGTTCCGCACCTTCGTGGAGCAAAACAATCTGCCGGTTGTCGCGGGATTCCGGTCGCAGGACGTGCTCGACAATCGCTCCGAACAATATATCGGCGACATCAGCCTCGGTTGCAGCCGGCCGCTGATGGCGCGGGTAAAGACGGCGGACCTGCTTCTTGTGATCGGTGATCGTCTCGGCGACGTCACCACCAATCATTATTCGCTGTTCGATGTGCCGACGCCGAAGCAGGCACTGATTCATGTTTTCCCCGGGCCGGAAGAACTCGGGCGAGTCTATGTGCCGACACTCGGCATTCCTGCCAATTCCTCTCGCTTTGCCGAAGCTCTCGCGCAGCTCGATCCTCTCGATCATTCGTCCTGGGATGCGTGGCGGGCGGAATCGCGTCTGGCCTATGTCGAGTATCAGGCGCCGCGACCGGATTTTCCGCCTTTCGATCTTGCGAAGGTGATTGATCACCTCAACACCGCATTACCTGACGATGCGATCGTAACAAACGGAGCCGGCAATTACACGGTCTGGCTGCACCGTTATTATCGCTATCGCGGCCTTGGCACCCAGATCGCTCCGAAGTCCGGCACCATGGGGTATGGACTGCCCGCCGCGGTCGCCGCGCAACTGCGCCATCCCGAACGCCGGGTTGTCTGTCTCGCCGGGGATGGCTGTTTCATGATGGCCTCGCAGGAATTCGCAACCGTCGTTCAGCAGAAGCTCCCGGTCGTCATCATCATCGTCAACAACACGATGTACGGCTCGATCCGCATGCATCAGGAATTGAGCTTTCCGAACCGCCCCAGCGGGACGGATCTGCTGAATCCGGATTTTGCAGCGCTGGCGAAATCCTATGGTGCGTATGGCGAAGCCATCGACGCACATGACGATTTCCCGGCGGCCTTTTCGCGTGCGGTTAACGCGGGTGGCCCCGCGATCATCGAACTTCGCGTCAACCGCAAGCAACTGACTCCGGATCGCTCGCTCTGA
PROTEIN sequence
Length: 559
MNKHQSAQAVTGEAGLRNGGQILVSALRRNGADRMFGVPGESALPIFDAVYEPDAGVRFIMCRHEATASHMAEADGKLSKRPGICVVSRGPGAMQAAIGLHTAWQDSTPMILIVGQVPRSHRGREAFQEMDYSRTFDDMTKWAVEIDSVDRIPEIVSRAFHVAMQGRPGPVVLSIPEDVLSATSSVADAAPATTIDAAPSAQQMADVRRLLQQAQRPLVIVGNLGWNVEAASRFRTFVEQNNLPVVAGFRSQDVLDNRSEQYIGDISLGCSRPLMARVKTADLLLVIGDRLGDVTTNHYSLFDVPTPKQALIHVFPGPEELGRVYVPTLGIPANSSRFAEALAQLDPLDHSSWDAWRAESRLAYVEYQAPRPDFPPFDLAKVIDHLNTALPDDAIVTNGAGNYTVWLHRYYRYRGLGTQIAPKSGTMGYGLPAAVAAQLRHPERRVVCLAGDGCFMMASQEFATVVQQKLPVVIIIVNNTMYGSIRMHQELSFPNRPSGTDLLNPDFAALAKSYGAYGEAIDAHDDFPAAFSRAVNAGGPAIIELRVNRKQLTPDRSL*