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SCNpilot_expt_1000_bf_scaffold_3179_curated_12

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(6799..7113)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DDC73D similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 104.0
  • Bit_score: 184
  • Evalue 6.50e-44
Uncharacterized protein {ECO:0000313|EMBL:EKS37691.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 104.0
  • Bit_score: 182
  • Evalue 2.70e-43
major facilitator superfamily permease similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 93.0
  • Bit_score: 77
  • Evalue 2.10e-12

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCCCGGCCTGCATGGCGCCCGGGCGCTTGCGGCCGCGTTCGGCTTCATGCTCGGCGCGTTCGGCCAGGTTCCGATCAACGACTTCATGATCGGCAAGATGGCGAGCGGCGAGGCCCGCGCCCGCATCTATGGCGTGCGCTATGTGGTCAGCTTCACGGTGTTCGCGCTGGCGCTGCCGATGATCTCATTCATCTACGGCAATTACGGCTTCGACACGCTGTTCCGCCTGATGGCGAGTTCGGCGGCGGTGATCTTCATCGCGGTGGCGTGCCTGCCGGCGAAACTGCCGCAGCCGGCGGCGGCAGCGGCGTAA
PROTEIN sequence
Length: 105
MPGLHGARALAAAFGFMLGAFGQVPINDFMIGKMASGEARARIYGVRYVVSFTVFALALPMISFIYGNYGFDTLFRLMASSAAVIFIAVACLPAKLPQPAAAAA*