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SCNpilot_expt_1000_bf_scaffold_3179_curated_16

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(9012..9956)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002D91F7C similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 314.0
  • Bit_score: 593
  • Evalue 1.40e-166
Uncharacterized protein {ECO:0000313|EMBL:EKS37688.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 314.0
  • Bit_score: 589
  • Evalue 2.20e-165
transcription factor jumonji, JmjC similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 312.0
  • Bit_score: 481
  • Evalue 2.40e-133

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGAACGCCACCTCCGGCATTGCGCCCGTCATCACTGCCGACAATGAATCCTTGAAGCGGGATTTTCCGCTCAAGCCTTTCGCGATCCGTCACAAGCTGGCGGGCCATCCGCTGCTCACGCTGACGCGTATCGCGCAACTCGCGGCCGACATGCCGCGCGACCTGATCGAATACAATTCGGGCAATGCCGATATCAGCCAGGATCCGGACAAGGTGCAGAGCGTCGATCTAAATCCGGTCGAGGTCGTCAACCGCATCCAGACCGCGGGCGCCTGGATGGTGCTCAAGCGCATCGAGAAGTCGCCGGAATATCGCGCGCTGCTGGAAGACGCACTGACCTCGGTGGCCCGCGCGCGCGGCTTCAAGAGCATCGAGGATGCAGGCTTCTCGCAGATCGAGGGCTTCCTGTTCGTCTCGTCGCCGAATTCGACTACGCCGTTCCACATGGACGCCGAGGACAATTTCTTCGTGCAGATCTATGGCGAGAAGATTTTCGCGGTGTACGACAACCGCGACGGCCAGATCGCCGACGACGCGCAGGTGGAGCATTCCACCGTCAAGCATCGCAATGTGCCGTTCAATGAAAGCTTCCGCCCGCGCGGGATCGAGTTCAATCTCGACGCCGGCGACGGCTGCTACATTCCCTACCAGTGGCCGCACTGGGTGAAGACCAAGGGATCGCACTCGATCTCGATGGCGATCACCTGGAAGACCGAAGAGGTGCGCCGCATGAACGACCTGCACCGCTTCAATTCGATGCTGCGCAGCCTCGGCCTGCCGCAGGCCGCGCCGGGCAAGAAACCCGCGCTCGATGGCATCAAGCTCGCGGCCTATCGCACCGCCGCCGCTGTCGTCGAACCGCTGCGCGGCTCGGAGACCATGCGCCGCGTGATCCGCCGTATCGCGCTCGGCAAGAACGCGAACTACTATCTGAAGAAGGCGTGA
PROTEIN sequence
Length: 315
MNATSGIAPVITADNESLKRDFPLKPFAIRHKLAGHPLLTLTRIAQLAADMPRDLIEYNSGNADISQDPDKVQSVDLNPVEVVNRIQTAGAWMVLKRIEKSPEYRALLEDALTSVARARGFKSIEDAGFSQIEGFLFVSSPNSTTPFHMDAEDNFFVQIYGEKIFAVYDNRDGQIADDAQVEHSTVKHRNVPFNESFRPRGIEFNLDAGDGCYIPYQWPHWVKTKGSHSISMAITWKTEEVRRMNDLHRFNSMLRSLGLPQAAPGKKPALDGIKLAAYRTAAAVVEPLRGSETMRRVIRRIALGKNANYYLKKA*