ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1469_curated_15

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(15018..15920)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 302.0
  • Bit_score: 516
  • Evalue 2.20e-143
Shikimate kinase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0W1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 302.0
  • Bit_score: 516
  • Evalue 1.60e-143
hypothetical protein; K15546 XRE family transcriptional regulator, aerobic/anaerobic benzoate catabolism transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 301.0
  • Bit_score: 410
  • Evalue 5.00e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGACCCAGCAGGCAGAGCCGGAAACCCAGTTCCTCGAACAGCTTGGACAGCGCGTCCGCACCATGCGGGCGATGCGCGGCATGTCGCGAAAGGTGCTGGCGAAAGCGTCGGGGATTTCGGAGCGCTACATCGCGCAGCTCGAAAGCGGCAAGGGCAACGTCTCCATCGTCCTGCTGCGGCGGGTGTCAGCGGCGATGGACAAGCAGGTGGAGGATCTGATCCCGGCCGCGGAAACCTCTCCGGACTGGCCGGTGATCCGCGACCTGATCCGCACCGCGACACCGGCGCAGATCGCGCAGGCGAAGGACATTCTCTCCGGCGGCGACGCGGCGCGCGCAAACCGCGAATTCGCAGGCATCGCGCTGATCGGCCTGCGCGGCGCGGGCAAATCCACGCTCGGCAAATTGCTGGCGAAGAAGATCGGCTGGCCGTTCGTCGAACTGAACAGGGAAGTCGAACGGATCAACGGGCTTTCCGTCGCGGAAATCATGGCGCTCTACGGCCAGGAAGGTTTCCGCCGCATGGAGCAGACCGCGCTGACGCAGGTGCTGACCAACAGCGAGCCGGTGGTGCTCGCCACCGGCGGCAGCATCGGCTCCGAGCCGGTGACCTTCGATCTGTTGCTGTCGTCGTTCTACACGGTATGGCTGCGCGCCAAGCCGGAGGAACACATGGGACGCGTGCGCAAACAGGGCGACATGCGGCCGATGGAAAGCGACCGCTCCGACATGCAGGAACTGCGCACCATCCTGCTCAGCCGCGAACTGCTCTATGCGCGCGCGGCGGCGGAAGTCCACACCGCCGATCTCACCATCGATGAAGCCGCCGCACGGCTCTACGACGCCGTCGCGCCGATCGTGGCGAAGCAGTCGCCGATGCCCCGCGCCGTCGCCATGCGATGA
PROTEIN sequence
Length: 301
MTQQAEPETQFLEQLGQRVRTMRAMRGMSRKVLAKASGISERYIAQLESGKGNVSIVLLRRVSAAMDKQVEDLIPAAETSPDWPVIRDLIRTATPAQIAQAKDILSGGDAARANREFAGIALIGLRGAGKSTLGKLLAKKIGWPFVELNREVERINGLSVAEIMALYGQEGFRRMEQTALTQVLTNSEPVVLATGGSIGSEPVTFDLLLSSFYTVWLRAKPEEHMGRVRKQGDMRPMESDRSDMQELRTILLSRELLYARAAAEVHTADLTIDEAAARLYDAVAPIVAKQSPMPRAVAMR*