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SCNpilot_expt_1000_bf_scaffold_2330_curated_5

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(3317..5290)

Top 3 Functional Annotations

Value Algorithm Source
metal ABC transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002DC5B78 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 657.0
  • Bit_score: 1183
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:EKS42220.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 657.0
  • Bit_score: 1181
  • Evalue 0.0
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 665.0
  • Bit_score: 1062
  • Evalue 0.0

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGGCCCACCTTTATCCTGCCCAGCCCGAGGACGCGCTGGACGACACCAGTCTGCCGACACCCGCTGACCTGAAAGCCGAGCAGGCGACCCTGTTCGGGACGCTTTCGCATTTGTGGCCGTTTATCTGGCCGAGCGAGCGCTTCGATCTCAAGATGCGCGTGGTCTGGTCGATGGTGTTGCTGCTGATCGCCAAGGCAGCGACGCTGGTGGTGCCGTTCACTTTCAAATGGGCGGTAGATGCGCTGACCGGCGCAGACACCGCGCCCGTGCAGGCGTCGAATTGGACGCTGTGGCTGATCGCATCGCCGATTATCATGACGCTGAGCTATGGCGCCATGCGCATCATCATGATGGTGCTGACGCAATGGCGTGACGGCTTGTTCGCCAGCGTCGCGATGCATGCGGTCCGCCGTTTGGCCTATCTCACCTTCGTCCACATGCATGAGTTGTCGCTGCGCTTCCATCTGGAGCGCAAGACCGGCGGTTTGACCCGCGTGCTCGAGCGCGGTCGCACCGGAATCGAGACCATGGTGCGCATGGTCATCCTTCAGCTCGCGCCGACCATCGTCGAGCTGGTGCTGATGATGGGCGTGCTCCTGTGGCAGTTCGACTGGCGCTATGTGCTGGTGACGTTCGTGACCGTCGTCATCTACATGCTGTTCACGTATTATGCGACGGAATGGCGGATCGAAATCCGCCGCCGCATGAACGATTCCGACACGGAGGCGAACACTAAGGCGATCGACTCGCTGCTCAATTACGAGACGGTGAAGTATTTCAGCGCGGAGGAGCGCGAGGCGCGGCGTTACGACAAATCGATGGAGCGTTACGAGCGTGCCAGCGTCAGCACCTATACATCGCTGGCGCTGCTCAACACCGGGCAGGCCATCATCTTCACCATCGGCTTGAGCGCGACCATGCTGATGTGCGCCATCGGCGTGCGCAACGGCACGCAGACGGTGGGTGATTTCGTCATGATCAATGCCATGATGATCCAGCTCTATCAGCCGCTGAATTTCATGGGCATGGTCTATCGCGAGATCAAGCAGGCGATCATCGACATCGAGAAGATGTTCGGCGTGCTTTCCCGGCATCCCGAGGTAAAGGATATTCCGAGCGCGCAGCCGCTGCACGTCGCCGCCGGCACCGTGCGTTTCGACGATGTGCGCTTTGCCTACGATCCCGAGCGGCCCATTCTGAAGGGCTTGAGCTTCGAGGTGCCTGCGGGCAAGACCGTCGCCATTGTCGGCCCGTCGGGGGCGGGCAAGTCCACCATCTCGCGGCTGCTGTTCCGGCTTTACGATGTGAGCGGCGGCCGGATCACCATCGACGGCCAGAACATTCGCGACGTCACGCAGGCATCGCTCCGCGCGTCCATCGGTATGGTGCCGCAGGATACCGTGCTGTTCAACGACACCATCCGTTACAACATCCGCTATGGCCGCTGGAATGCAACCGACGCGGAGGTGGAAGCAGCGGCTGCGATGGCGCAGATCGACGGCTTCATTCGCCGCTCGCCCCATGGCTATGATACCGAGGTGGGCGAGCGCGGGCTGAAGCTCTCCGGCGGCGAGAAGCAACGTGTCGCCATCGCCCGCACAATTCTCAAAGCGCCGCCGATTCTCGTGCTGGACGAAGCGACCTCGGCGCTCGACAGCCACACCGAGCAGGAAATCCAGGACGAGTTGGACAAGGTGTCGCGCGGCCGCACGTCGCTGGTGATCGCGCATCGGTTGTCCACGATTGTCGGAGCCGACGAGATCATCGTGCTCGATCAGGGCCGTATTGCCGAACGTGGCACCCATTCGCAACTCCTAGCCGCAAACGGCCTTTACGCGAGCATGTGGAACAGGCAACGTGAGGCTCAGGAAGCGCGGGAAAAGCTGGCCACGATGGCCGACGAGAACATCGCGCCCAATCGTGTGCCGCCGCCAGTCGACGATTCGCTGGCAGCGCCGGAAGCCGCCGAATAA
PROTEIN sequence
Length: 658
MAHLYPAQPEDALDDTSLPTPADLKAEQATLFGTLSHLWPFIWPSERFDLKMRVVWSMVLLLIAKAATLVVPFTFKWAVDALTGADTAPVQASNWTLWLIASPIIMTLSYGAMRIIMMVLTQWRDGLFASVAMHAVRRLAYLTFVHMHELSLRFHLERKTGGLTRVLERGRTGIETMVRMVILQLAPTIVELVLMMGVLLWQFDWRYVLVTFVTVVIYMLFTYYATEWRIEIRRRMNDSDTEANTKAIDSLLNYETVKYFSAEEREARRYDKSMERYERASVSTYTSLALLNTGQAIIFTIGLSATMLMCAIGVRNGTQTVGDFVMINAMMIQLYQPLNFMGMVYREIKQAIIDIEKMFGVLSRHPEVKDIPSAQPLHVAAGTVRFDDVRFAYDPERPILKGLSFEVPAGKTVAIVGPSGAGKSTISRLLFRLYDVSGGRITIDGQNIRDVTQASLRASIGMVPQDTVLFNDTIRYNIRYGRWNATDAEVEAAAAMAQIDGFIRRSPHGYDTEVGERGLKLSGGEKQRVAIARTILKAPPILVLDEATSALDSHTEQEIQDELDKVSRGRTSLVIAHRLSTIVGADEIIVLDQGRIAERGTHSQLLAANGLYASMWNRQREAQEAREKLATMADENIAPNRVPPPVDDSLAAPEAAE*