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SCNpilot_expt_1000_bf_scaffold_2330_curated_8

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(6532..8130)

Top 3 Functional Annotations

Value Algorithm Source
(R)-citramalate synthase {ECO:0000313|EMBL:EGP07867.1}; EC=2.3.1.182 {ECO:0000313|EMBL:EGP07867.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 532.0
  • Bit_score: 1003
  • Evalue 1.40e-289
alpha-isopropylmalate synthase (EC:2.3.3.-); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 530.0
  • Bit_score: 922
  • Evalue 5.30e-266
(R)-citramalate synthase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLL4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 532.0
  • Bit_score: 1003
  • Evalue 9.90e-290

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
ATGAGCCGGGAACGACTTTATCTGTTCGATACGACGCTGCGCGACGGCGCTCAGACCAACGGTGTCGATTTCACGCTGCACGACAAGCAGATCATCGCGGGCATGCTCGATGATCTTGGCATCGATTATGTCGAGGGCGGTTATCCGGGCGCGAATCCGTCCGATACGGAATTCTTTGCTGCCAAGCCGAAGTTCGATCATGCAAAGTTCACTGCCTTCGGCATGACGCGACGTGCAGGCCGCTCGGCGTCCAACGATCCGGGTGTCGCGGCGCTTCTCGAGGCAAAAGCAGATGCTATCTGCTTCGTGGCGAAGTCCTCCGAGTATCAGGTGCGTGTCGCGCTCGAGACCACCAACGAGGAAAATCTTGCCTCGATCCGCGACAGCGTCAGCACCGCGAAAGCTGCGGGCCGGGAAGTGATGCTCGACTGCGAGCATTTCTTCGACGGCTACAGGGAAAACCCGCAGTTTGCTTTGGCCTGCGCCAAGGCCGCTTATGACGGCGGTGCGCGCTGGGTCGTGCTGTGCGACACCAATGGCGGCACCATGCCGAACGAAATCGAAGCGATTGTCAGCGCGGTGGTGAAGCAGATTCCCGGGGACCATCTTGGTATCCATACCCATAACGACACCGAGCAGGCGGTGGCGAATTCTCTGGCCGCGGTGCGCGCGGGGGTGCGGCAGATCCAGGGCACACTGAACGGTCTTGGCGAGCGCTGCGGCAACGCCAACCTCTGCTCGCTGATCCCGACGCTGAAGCTGAAGAAGGAATTCGCCGACAGGTTCGAGATCGGCGTGTCGGACGACAAGCTGGCGACGCTGGTCCACGCCTCGCGCGCGCTCGACAACATTCTCAACCGCGCGCCGGATCGTCATGCGCCGTATGTCGGCGAAAGCGCCTTCGTGACCAAGACCGGTATTCATGCCTCTGCCGTCCTGAAAGATCCGCAGACCTACGAGCACATTGCGCCCGAGGCGGTCGGCAATCACCGGAAGGTGCTGGTCTCAGATCAGGCCGGACGCTCCAATGTCATCGCCGCGCTGGAGCGTGCAGGCCTTCCGTTCGACAAGAACGATGCCAAGCTGACGCGCCTTGTCGAGGAGATGAAGGAGCTGGAAGCGGCAGGCTATGCTTATGAGTCGGCGAACGCATCGTTCGACCTGCTGGCGCGGCGCACGCTCGGCAAGGTGCCGGATTTCTTCAAGGTTGTGCAGTTCGATGTGAATGTCGAGCAGCGTTACAACGCGCTGGCCCAGCGGGTCACAGTCGCGATGGCGGTGGTGAAGGTCGATGTCGCGGGCGAAATGCTGATCTCGGCGGCGGAAGGCAACGGCCCGGTGAACGCGCTCGACGTCGCGTTGCGCAAGGACCTCGGCAAGTATCAGAAGTATATCGATGGATTGAAGCTGGCCGACTACCGTGTGCGTATCCTCAACGGCGGTACGGAAGCGGTGACGCGTGTGTTGATCGAGAGTGAAGATGAAACGGGCGAGCGCTGGACCACCATCGGTGTGTCACCCAATATCATCGATGCGTCGTTCGAGGCGTTGATGGATTCGGTCATCTACAAGCTGGTGAAGTCGAACGCGCCGTCATAG
PROTEIN sequence
Length: 533
MSRERLYLFDTTLRDGAQTNGVDFTLHDKQIIAGMLDDLGIDYVEGGYPGANPSDTEFFAAKPKFDHAKFTAFGMTRRAGRSASNDPGVAALLEAKADAICFVAKSSEYQVRVALETTNEENLASIRDSVSTAKAAGREVMLDCEHFFDGYRENPQFALACAKAAYDGGARWVVLCDTNGGTMPNEIEAIVSAVVKQIPGDHLGIHTHNDTEQAVANSLAAVRAGVRQIQGTLNGLGERCGNANLCSLIPTLKLKKEFADRFEIGVSDDKLATLVHASRALDNILNRAPDRHAPYVGESAFVTKTGIHASAVLKDPQTYEHIAPEAVGNHRKVLVSDQAGRSNVIAALERAGLPFDKNDAKLTRLVEEMKELEAAGYAYESANASFDLLARRTLGKVPDFFKVVQFDVNVEQRYNALAQRVTVAMAVVKVDVAGEMLISAAEGNGPVNALDVALRKDLGKYQKYIDGLKLADYRVRILNGGTEAVTRVLIESEDETGERWTTIGVSPNIIDASFEALMDSVIYKLVKSNAPS*