ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2330_curated_11

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(8767..10176)

Top 3 Functional Annotations

Value Algorithm Source
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 469.0
  • Bit_score: 879
  • Evalue 2.70e-252
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 478.0
  • Bit_score: 680
  • Evalue 4.10e-193
Cysteine--tRNA ligase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PN52_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 469.0
  • Bit_score: 879
  • Evalue 1.90e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGGAGCTCAAGCTCTACGACACGCTGACCAAGGAGAAGCAGCCGTTCCGGCCGCTCGATCCGAACAACGTGCGCATGTATGTGTGCGGACCGACGGTCTACGACTTCGCGCATATCGGCAACGCCCGCCCGGTCATTGTCTTCGACGTGCTGTTCCGCCTGCTGCGGCACGTCTATGGCGAAGGCCATGTCACCTATGTCCGCAACATCACCGACGTCGATGACAAGATCAACGATCGCGCGGCCCGCGACTATCCGAGCCTGTCGCTGAACGAGGCGATCCGCAAGGTCACCGAGCAGACTGAAAAGCAGTTTCACGAGGATGTCGACGCGTTGGGCTGCTTGCGGCCGACCGTCGAGCCGCGCGCGACCGAGCATATCGCGGAGATGCGGGCGATCATCGAAAAGCTGATCGCGGGCGGGAATGCCTATGTCGAGCAGGATCACGTCCTGTTCAAGGTGTCGTCCGATCCCAATTACGGCAAGCTGGCCCGCCGGTCGCTCGACGAAATGCTGGCGGGCGCTCGCGTCGATGTCGCGCCCTACAAGCATGACGCGATGGACTTCGTGCTGTGGAAACCATCGAAGCCGGGTGAGCCGTCATGGCCGTCGCCGGGCGGCATCACGGTGGAGGGACGTCCGGGCTGGCACATCGAATGCTCCGCGATGTCGTGGAAGCATCTCGGCGAACAGTTCGACATTCACGGCGGCGGCATCGATCTCGTATTTCCGCATCACGAGAACGAACTGGCGCAGTCCTGCTGTGCATTCCACAAAAATCGCATGGCGAATGTCTGGATGCACAACGGCTTCCTGCAGGTCGAAGGCGAGAAGATGTCGAAAAGCCTTGGCAACTTCGTCACGATCCGGGAGTTGCTGGTGGGCTGGCGGGGCCGTTCATGGCCGGGTGATGCGCTGCGCTTCGCGATGATGCAGACGCATTATCGCTCGCCCATCGATTGGTCGTTGGCCGCATGCGATGCGGCCCTCGCGACGCTGAAGGATTTCTTCAGTGTGGCCGCACCGACATCGGGGCCGCCGCCTGTGTCGATCGTGGAGGCATTGAGCGACGACCTCAACACGCCGAAGGTCATTGCCGAGCTTCATGCCCTGCGAAAGCAGGTTCAGAATATGGGCGACGAGGCATCGATGGCGCTGGGAAATGCACTGTCGTTCCTTGGACTCGATGCCACCCGTTTCGCCGCATGGATTTCACAGGCCAATGCCAATGCCGTTTCCAAGGCGGGCAATGTCGATGATCTGATCGTGGCGCGTGCGGAAGCACGTGCGCGCAAGGATTTCAAGGAATCCGACCGCATCCGCGATGAGCTTGCAGCGCGCGGCATCGTGCTCAAGGACGGCAAGGATGCGGATGGCAACCCGGTGACCACATGGGAGATCGCGCGATGA
PROTEIN sequence
Length: 470
MELKLYDTLTKEKQPFRPLDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGEGHVTYVRNITDVDDKINDRAARDYPSLSLNEAIRKVTEQTEKQFHEDVDALGCLRPTVEPRATEHIAEMRAIIEKLIAGGNAYVEQDHVLFKVSSDPNYGKLARRSLDEMLAGARVDVAPYKHDAMDFVLWKPSKPGEPSWPSPGGITVEGRPGWHIECSAMSWKHLGEQFDIHGGGIDLVFPHHENELAQSCCAFHKNRMANVWMHNGFLQVEGEKMSKSLGNFVTIRELLVGWRGRSWPGDALRFAMMQTHYRSPIDWSLAACDAALATLKDFFSVAAPTSGPPPVSIVEALSDDLNTPKVIAELHALRKQVQNMGDEASMALGNALSFLGLDATRFAAWISQANANAVSKAGNVDDLIVARAEARARKDFKESDRIRDELAARGIVLKDGKDADGNPVTTWEIAR*