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SCNpilot_expt_1000_bf_scaffold_2330_curated_19

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(17725..18423)

Top 3 Functional Annotations

Value Algorithm Source
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 231.0
  • Bit_score: 400
  • Evalue 1.40e-108
ribose 5-phosphate isomerase; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 235.0
  • Bit_score: 380
  • Evalue 3.30e-103
ribose 5-phosphate isomerase n=1 Tax=Afipia birgiae RepID=UPI0002FA533B similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 232.0
  • Bit_score: 407
  • Evalue 8.00e-111

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTCGATGGACGATCTGAAGAGGCAGGCGGCGGCGCGCGCTCTCGAGCAGGTGCAGGACGGCANNNNNNNNGGTCTCGGCACGGGATCGACTGCGAAGCATTTCGTCGAACTGCTCGGCGAGCGTGTCCGGACCGGCCTGAAGATCATCGGTGTGCCGACATCGGAAGCGACACGCGCTGATGCGGAGCGTTGCGCTGTGCCGCTGACGACGCTCGACCAGATCGACCGGCTCGACCTCACGGTGGACGGCGCCGACGAAGTCGATCCGAATCTCAACCTCATCAAGGGCGGCGGCGGAGCCCTGCTGCGCGAGAAGATCGTCGCGGCAGCTTCCGACCGCATGATCGTGATCGCGGACGAGACCAAATGGGTGCAGACCCTCGGCCGTTTTCCGCTTCCGATTGAGGTCATCCCGTTCGGTCTCGGCGCGACGCGCCGCGCGATCGAGGCGGCTTTCTCGAAAAATAGCGTGTCCGGACAAATGGATATCCGCAAGGCCAAGGATGGCCATGCTTTTGTCACCGATGGTGGCCACTGGATCGTGGACGCCCGCCTTGGGCAAATTCCGGATTCGCCGGGACTGGCTGCGGCGTTGAGTTCGATTCCGGGTGTCGTGGAGCACGGCTTGTTTATCGGCCTGGCCAGCATGGCCGTGCTGGCAGGGTCACAGGGTATTCGCGTTGTCGAGCGGCCTTAA
PROTEIN sequence
Length: 233
MSMDDLKRQAAARALEQVQDGXXXGLGTGSTAKHFVELLGERVRTGLKIIGVPTSEATRADAERCAVPLTTLDQIDRLDLTVDGADEVDPNLNLIKGGGGALLREKIVAAASDRMIVIADETKWVQTLGRFPLPIEVIPFGLGATRRAIEAAFSKNSVSGQMDIRKAKDGHAFVTDGGHWIVDARLGQIPDSPGLAAALSSIPGVVEHGLFIGLASMAVLAGSQGIRVVERP*