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SCNpilot_expt_1000_bf_scaffold_687_curated_3

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(1068..2741)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Afipia birgiae RepID=UPI000374E580 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 529.0
  • Bit_score: 876
  • Evalue 1.90e-251
Uncharacterized protein {ECO:0000313|EMBL:EGP07694.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 508.0
  • Bit_score: 834
  • Evalue 8.90e-239
hpnN; hopanoid biosynthesis associated RND transporter like protein HpnN; K07003 similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 555.0
  • Bit_score: 729
  • Evalue 9.10e-208

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
GTGCTGACAAGGAATATTGTATCGCTTGTTCGTTTTTGCACGCGCCACGCATGGCTGGTCCTCCTGGCCGGCTTGGCTCTGGCAGCGGGAGCAGGCGTCTACTCCTACCGGAACTTTGCCATCAACACCGATGTTGCGAAGCTTATTTCTCCCGATCTGGACTGGCGAAAGCGCGAAATCGACTTCGAAAAGGCGTTTCCGGGCAAAAATGACACGATTCTGGCCGTTGTAGAGGCCCCCACGCCGGAACAGGCCCGACAGGCTGGCGCGGCCCTCGAGAAGAAGTTGCAGCCACAGACCGATAGGTTCATTTCGATCCAGCAACCGGGTGGCGGACCGTTCTTCGACAGTAACGGACTTTTGTTCCTGCCGACCCCCGAAGTGGCCAAGCAGACCAGCCAACTGGCCTCGGCAGCCCCTCTGTTCAACATCCTGGTGGACGACCCCAGCCTGCGCGGCCTGACCGGCGTGCTGGAATTCGGCCTGCAGGGCGCCCAGCGTGGCCAGTATTCCCGCGATTCCATGGTGCGGCCCCTGAACCAGGTGGCCGAAACCGTCGAGAAAGTGCTGGCGGGCCAGCCCGCGCCGTTCTCCTGGAAGGAACTGTCATCCGACCAGCCGCTGACCGCCTCGGACAAGCGCGAACTGTTTCTGATCCGGCCGGTGCTTGACTTCAAGGCGCTGGAACCGGGCGGGGCGGCGACCGATGCCATCCGCAAGGCGGCAACCGATCTCGATCTGGCCGGGAAGTACAATGCGCGGGTGCGCCTGACCGGACCGGTCCCGATCGCCAATGAGGAGTTTGCGACCGTTCAGGAGAACGCGTTCCTCACGCACTCCCTGACCGTGCTGATCGTGCTGTTCATCCTGTGGTGCGCATTGAAGTCGCCGAAGATCATCACGGCGGTGTTCATCACGCTGGTGATCGGCCTCGCGGTCACGACCGCCGTCGGCCTGATGCTGGTCGGTGCATTCAACCTGATCTCGATCGCATTCTTCGTGCTGTTCGTGGGTCTCGGCGTGGACTTCGGCATTCAGTACAGCGTGCGTTATCGCGCCGACCGTCATGAGGGACACGACCTGAGCCTCGCGCTGGAGAAGGCGGGTCAGTATTCCGCCGTTCCGCTCACCCTCGCGGCGGTCGCAACCGCCGCGGGCTTCCTGTCGTTCATGCCGACCGACTACAAGGGCGTCTCCGAACTCGGCAAGATCGCAGGCGCGGGCATGCTGATCGCGTTCATCGCGGCGATCACCGTGCTGCCGGCCCTGCTCAAGCTGATGAATCCCGCGGGCGAAGCCGAGCCGCTGGGCTTCACCTTCCTGGCTCCGGTCGACGATTTCCTCGAGCGGCATCGCATCGGTGTCGTGGCCTGGACCATCGGCGTGGCCGTTGCCGGCCTGCCGCTGCTTTACTTCCTGCACTTCGACTTCAACCCGATCAACCTGCGCAATCCGAAGGTCGAATCGATCGCGACCTATCTTGATCTGCGCCGCGATCCGAACACCGGCACCAACGGGGTCGAGGTTCTCGCGCCGTCGGCCGCCGCGGCCAAGGACGTGCAGGCGCGGCTCGCGAAGCTGCCGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAAGCTCGCAATCATCCGCAGGGCGGCTGCGCAGCTCAACCCGATCCTGA
PROTEIN sequence
Length: 558
VLTRNIVSLVRFCTRHAWLVLLAGLALAAGAGVYSYRNFAINTDVAKLISPDLDWRKREIDFEKAFPGKNDTILAVVEAPTPEQARQAGAALEKKLQPQTDRFISIQQPGGGPFFDSNGLLFLPTPEVAKQTSQLASAAPLFNILVDDPSLRGLTGVLEFGLQGAQRGQYSRDSMVRPLNQVAETVEKVLAGQPAPFSWKELSSDQPLTASDKRELFLIRPVLDFKALEPGGAATDAIRKAATDLDLAGKYNARVRLTGPVPIANEEFATVQENAFLTHSLTVLIVLFILWCALKSPKIITAVFITLVIGLAVTTAVGLMLVGAFNLISIAFFVLFVGLGVDFGIQYSVRYRADRHEGHDLSLALEKAGQYSAVPLTLAAVATAAGFLSFMPTDYKGVSELGKIAGAGMLIAFIAAITVLPALLKLMNPAGEAEPLGFTFLAPVDDFLERHRIGVVAWTIGVAVAGLPLLYFLHFDFNPINLRNPKVESIATYLDLRRDPNTGTNGVEVLAPSAAAAKDVQARLAKLPEXXXXXXXXXXXXPSSQSSAGRLRSSTRS*