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SCNpilot_expt_1000_bf_scaffold_687_curated_8

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(7948..9918)

Top 3 Functional Annotations

Value Algorithm Source
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 654.0
  • Bit_score: 1055
  • Evalue 0.0
Squalene-hopene cyclase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWJ1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 657.0
  • Bit_score: 1223
  • Evalue 0.0
Squalene-hopene cyclase {ECO:0000313|EMBL:EKS42713.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 657.0
  • Bit_score: 1223
  • Evalue 0.0

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1971
ATGACTCTCGAGGACCAGAAGGCCGATGCCGCACCGTCCGCGGCGGCTGTTGATACCAGCATCGCCGCTGCGAGCAGTGCGCTGCTCGGCCATCGCCAGAGCGACGGCCATTGGGTATTTGAACTCGAAGCCGACGCGACCATTCCGTCCGAATACGTTCTGCTGCGCCATTATCTCGCCGAGCCGATCAATCGCGAACTGGAAGCGAAGATCGGCAACTACCTGCGCCGCATCCAGAACGCCAACGGCGGCTGGTCGCTGTTCTACGGCCACGAGTTCGACATGAGCGCCAGCGTGAAGGCTTACTTCGCGCTGAAGATGATCGGCGATTCCGTGGACGCGCCGCACATGGTGCGGGCGCGCGAAATCATCCGGGCGCGGGGCGGGGCGGCCAAGAGCAACGTCTTCACGCGCATCATGCTGGCGCTGTTCGGCGTCGTGACATGGCGGGCCGCGCCGATGATGCCGGTCGAGATCATGCTGCTGCCGCGGTGGTTTCCATTCCACCTGACCAAGATCTCGTACTGGGCGCGCACGGTGATCGTGCCGCTGCTGGTGCTGATGAACAAGAAGCCGTGCGCGCGCAATCCGCTCGGCGTCGGCATCGACGAACTGTTTCTGGAAGATCCGAAGTCCATCGGCATGACGCCGAAGGCGCCGCACCAGAGCCAGCTCTGGTTCACAGGCTTCGACATCCTGGACCGCGTGCTGCGCGTGGTCGATCCGTTCTTCCCGAAGAAGAGCCGCCAGCGCGCCATCGACAAGGCGGTGGAATTCGTTACCGAGCGTCTCAACGGCGTCGATGGCCTCGGCGCGATCTTCCCGGCGATGGCCAACACCGTGATGGTCTACGATCTGCTCGGCTATCCGAAGGATCATCCGCACTATGTGCTGGCGCGGCAGTCGGTAGAGAACCTGCTGGTCATCAAGGACGACGAGGCCTATTGCCAGCCGTGCGTGTCGCCGGTCTGGGATACGGCGCTGACGGCGCATGCCATGATCGAAGTCGGCGGCGAGAAGGAAATCGAATCCGCCAAGGCGGCGCTGGAATGGCTGAAGCCGAAGCAGGTGCTCGACGTTGTCGGCGACTGGGCTGACAAGCGGCCCGGCGTGCGTCCGGGCGGCTGGGCGTTCCAGTACAACAACGCGCACTATCCCGATCTCGATGACACCGCCGTCGTCGTGATGGCGATGGACCGCGCGCGCGGCAAGCTCAATGTCGGCGAAAAGTACGATGAGGCGATTGCCCGCGGCCGCGAGTGGATCGATGGCCTGCAGAGCAAGGACGGCGGCTGGGCCGCGTTCGATGCCGACAACCTCGAATACTATCTCAACAACATCCCGTTCTCCGATCACGGCGCGTTGCTCGATCCGCCGACGGAGGACGTGACCGCGCGCTGCGTCTCGATGCTGGCGCAGCTTGGCGAGACCATCGAAGGCAATCCAGCGCTGGCGCGGGGCGTCGAGTATCTGCGCCGCACCCAACTGGCCGACGGGTCCTGGTTCGGCCGCTGGGGCGTGAACTATATCTACGGCACATGGTCGGTGCTCTGCGCGCTGAATGCGGCGGGCGTCCCCCACGACGATCCGGCGATCGCCAGGGCGACCGACTGGCTGATTTCGATCCAGAATCCGGACGGCGGCTGGGGCGAGGACGGGAACAGCTACCGGCTGGAGTACAAGGGCTATGAGCGTTCCGAATCAACGGCCTCGCAGACTGCCTGGGCGACCATCGCCCTGATGGCGGCGGGGAAGGTCGATCATCCGGCGACTCAGCGCGGCATCGCGTATTTGATTCAAAATCAGACCAAGGATGGCCTCTGGACCGAGCCGAACTACACCGGCGGCGGGTTCCCACGTGTGTTCTATTTGCGATACCACGGATATTCTAAGTTCTTTCCGCTGTGGGCGCTGGCGCGCTATCGCAACTTGCGCAATACTAACAGCCGCTTCGTGGGGATTGGAATGTGA
PROTEIN sequence
Length: 657
MTLEDQKADAAPSAAAVDTSIAAASSALLGHRQSDGHWVFELEADATIPSEYVLLRHYLAEPINRELEAKIGNYLRRIQNANGGWSLFYGHEFDMSASVKAYFALKMIGDSVDAPHMVRAREIIRARGGAAKSNVFTRIMLALFGVVTWRAAPMMPVEIMLLPRWFPFHLTKISYWARTVIVPLLVLMNKKPCARNPLGVGIDELFLEDPKSIGMTPKAPHQSQLWFTGFDILDRVLRVVDPFFPKKSRQRAIDKAVEFVTERLNGVDGLGAIFPAMANTVMVYDLLGYPKDHPHYVLARQSVENLLVIKDDEAYCQPCVSPVWDTALTAHAMIEVGGEKEIESAKAALEWLKPKQVLDVVGDWADKRPGVRPGGWAFQYNNAHYPDLDDTAVVVMAMDRARGKLNVGEKYDEAIARGREWIDGLQSKDGGWAAFDADNLEYYLNNIPFSDHGALLDPPTEDVTARCVSMLAQLGETIEGNPALARGVEYLRRTQLADGSWFGRWGVNYIYGTWSVLCALNAAGVPHDDPAIARATDWLISIQNPDGGWGEDGNSYRLEYKGYERSESTASQTAWATIALMAAGKVDHPATQRGIAYLIQNQTKDGLWTEPNYTGGGFPRVFYLRYHGYSKFFPLWALARYRNLRNTNSRFVGIGM*