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SCNpilot_expt_1000_bf_scaffold_2378_curated_10

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(9340..10326)

Top 3 Functional Annotations

Value Algorithm Source
microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Afipia birgiae RepID=UPI0003731888 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 328.0
  • Bit_score: 613
  • Evalue 1.40e-172
Oligopeptide transport system permease protein {ECO:0000313|EMBL:EGP08886.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 328.0
  • Bit_score: 611
  • Evalue 7.30e-172
ABC transporter-like protein; K13896 microcin C transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 325.0
  • Bit_score: 569
  • Evalue 9.30e-160

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
CATGATCTCGGCATCGTGCGGCGCATCGCCGATGTGGTCTGCGTCATGAACCACGGCAAGATCGTCGAGCAGGGACCGGTGGAGCAGGTGTTCACCGCCGCGCAGCATCCTTACACCAAGGCGCTGCTGGCGGCGGAGCCGAAGCCCGATCCCGCGCCGCCGCGCCCCGATGCGCCGGTGGTGATGTCGTCCGACGATCTCAAGGTCTGGTTTCCGATCAAGCGCGGCGTCATGCGCAAGACGGTCGGTCACATCAAGGCGGTGGATGGCGTCAGCATGTCGGTGCGTCAGGGCGAGACGCTCGGCGTGGTCGGCGAATCCGGTTCGGGCAAGACCACGCTCGGCCTCGCGCTGCTGCGGCTGATCTCGTCGCAGGGGCCGATCGTGTTTCTCGGAAAGGACATTCAGGGCCTGAACTTCAAGCAGATGCGTCCGGTTCGACGCGACATGCAGATCGTGTTTCAGGACCCGTTCGGCGCGCTCAGCCCGCGCATGTCGGTAGGGGACATTATCGCCGAAGGTCTCGGCGTGCATCAGCCATCGTTGACGCAGGACGAGCGTGACGCCCGCGTCGTCAAGGCGCTGACCGATGTCGGCCTCGATCCGGCGACGCGTTTCCGTTATCCGCATGAATTCTCCGGCGGCCAGCGCCAGCGCATTTCGATCGCGCGCGCGGTGGTGCTGGAGCCGAATTTCATCGTGCTGGATGAGCCGACCAGCGCGCTCGACATGCTGTTCCAGGCGCAGATGGTCGATCTGCTGCGCGACCTGCAGCGCAAGCGCGACCTCACTTATATGTTCATCTCGCACGATCTGCGGGTGGTGGCGTCGCTGGCGAGCAACCTGATTGTGATGCGTCACGGCAAGGTGGTGGAGCAGGGCGCGGCTGCGGATATTTTCAAGAATCCGGCGTCGGATTATACCCGCGCGCTGTTCGCGGCGGCGTTCAATATCGAAACCGCGCCCAATATCGTGCCGGAGATTTGA
PROTEIN sequence
Length: 329
HDLGIVRRIADVVCVMNHGKIVEQGPVEQVFTAAQHPYTKALLAAEPKPDPAPPRPDAPVVMSSDDLKVWFPIKRGVMRKTVGHIKAVDGVSMSVRQGETLGVVGESGSGKTTLGLALLRLISSQGPIVFLGKDIQGLNFKQMRPVRRDMQIVFQDPFGALSPRMSVGDIIAEGLGVHQPSLTQDERDARVVKALTDVGLDPATRFRYPHEFSGGQRQRISIARAVVLEPNFIVLDEPTSALDMLFQAQMVDLLRDLQRKRDLTYMFISHDLRVVASLASNLIVMRHGKVVEQGAAADIFKNPASDYTRALFAAAFNIETAPNIVPEI*