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SCNpilot_expt_1000_bf_scaffold_2378_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2378_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..304
DNA (303bp) protein (101aa)
Type II and III secretion system protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR65_NITHX
type II and III secretion system protein; K02280 pilus assembly protein CpaC
Type II and III secretion system protein {ECO:0000313|EMBL:ABE61282.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_2378_curated_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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327..1064
DNA (738bp) protein (246aa)
pilus assembly protein n=1 Tax=Afipia birgiae RepID=UPI000314C77A
Pilus (Caulobacter type) biogenesis lipoprotein CpaD {ECO:0000313|EMBL:EKS32576.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
pilus assembly protein CpaD; K02281 pilus assembly protein CpaD
SCNpilot_expt_1000_bf_scaffold_2378_curated_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1061..2326
DNA (1266bp) protein (422aa)
Type II/IV secretion system ATPase TadZ n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIT0_9BRAD
Type II/IV secretion system ATPase TadZ {ECO:0000313|EMBL:EGP08893.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
pilus assembly protein cpaE; K02282 pilus assembly protein CpaE rbh
SCNpilot_expt_1000_bf_scaffold_2378_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2348..3811
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P363_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34130.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF
SCNpilot_expt_1000_bf_scaffold_2378_curated_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3823..4794
DNA (972bp) protein (324aa)
pilus assembly protein n=1 Tax=Afipia birgiae RepID=UPI00036515ED
Uncharacterized protein {ECO:0000313|EMBL:EKS32573.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
pilus assembly protein membrane protein; K12510 tight adherence protein B
SCNpilot_expt_1000_bf_scaffold_2378_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4805..5782
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUX6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34132.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
type II secretion system protein; K12511 tight adherence protein C
SCNpilot_expt_1000_bf_scaffold_2378_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5971..6774)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34133.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2378_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6975..8351
DNA (1377bp) protein (459aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P063_9BRAD
SCNpilot_expt_1000_bf_scaffold_2378_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8344..9213
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NVN7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32569.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2378_curated_10
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9340..10326)
DNA (987bp) protein (329aa)
microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Afipia birgiae RepID=UPI0003731888
Oligopeptide transport system permease protein {ECO:0000313|EMBL:EGP08886.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ABC transporter-like protein; K13896 microcin C transport system ATP-binding protein
Displaying 10 items

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