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SCNpilot_expt_1000_bf_scaffold_2378_curated_1

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 2..304

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR65_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 101.0
  • Bit_score: 169
  • Evalue 1.60e-39
type II and III secretion system protein; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 101.0
  • Bit_score: 169
  • Evalue 5.00e-40
Type II and III secretion system protein {ECO:0000313|EMBL:ABE61282.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 101.0
  • Bit_score: 169
  • Evalue 2.20e-39

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
CTGATCCAGCAGCAGACCAAGCAGGCGATCAACGGCATGCCCGGCGTCGGCCAGATTCCGGTTCTCGGCACGCTGTTCCGCAGCCGCGACTTCGTCAACAACTCCACCGAACTCATGGTCATCACGACGCCGTACATCGTCCGCGCCGTCGCGCAGAAGGATCTGTCGCGTCCCGACGACGGCTTCGCGGAAGCGTCGGACCCGCAGGCCGATCTGCTCGGCACCATCAACCGCATCTACGGCGTTCCGGGCCGCGCGCCCAACAAGGCCACCAGCGGCAAGTACGGCTTCATTACGGATTGA
PROTEIN sequence
Length: 101
LIQQQTKQAINGMPGVGQIPVLGTLFRSRDFVNNSTELMVITTPYIVRAVAQKDLSRPDDGFAEASDPQADLLGTINRIYGVPGRAPNKATSGKYGFITD*