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SCNpilot_expt_1000_bf_scaffold_2378_curated_2

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 327..1064

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein n=1 Tax=Afipia birgiae RepID=UPI000314C77A similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 245.0
  • Bit_score: 418
  • Evalue 3.70e-114
Pilus (Caulobacter type) biogenesis lipoprotein CpaD {ECO:0000313|EMBL:EKS32576.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 245.0
  • Bit_score: 399
  • Evalue 2.50e-108
pilus assembly protein CpaD; K02281 pilus assembly protein CpaD similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 236.0
  • Bit_score: 346
  • Evalue 5.60e-93

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGACGATGCCAGTTCCCGATCTCAAGCGCAGACTGCGCCTCGCGGCCGCCCTTCTCGGGGCGTCTGCCGCTTTGGGCGCCTGCACGCATACCAACCAGGAAACGGTGACGGGCAGCATTCCGGGCGACTACCGCCAGCGCCACCCCATCGTGATCCAGGAAGCCAATCGCGCCACCGAAGTGTTTGTCGGCAGCGGCCGCGGCGGCCTCACCGGCGCGCAACGCAGCGATATTGCCGGGCTCGCGGAGGCATGGCTGCGCGAAGGCACCGGCGCCATCGTGATCGATATGCCGGTGAACACACCGAACGCGCGTGTCGCCAGCGATTCCCTGCGCGAAATCCGGGCGATCCTCTCCGCCATCGGCGTGCCGCCGCACGGCATCACCGTGCGCAACTATCGCCCGAGCGATCCGCGCCTGTTTGCCACCATTCGCGTGAATTATCCGCGGATCACGGCGGATGCCGGGCCTTGCGGCACATGGCCGGAAGACATCGGCCCGTCGATCAAGAACAAGAGCTATCTCGAGAACAAGCAGTACTACAATTTCGGCTGCGCCTCGCAGCGCAATCTTGCCGCCGTGGTCGCCAATCCATCCGATCTGGTTCAACCCCGGCAGGAAACCCCACCTTACGGCGCTCGCCGTGTCGTGGTCCTGGACAAGTACCGCAAGGGCGAGGGCAGCGCGACAGTCTATCCTGACGATCAGAAGAACAAGATCAGCAACGTGGGCCAATGA
PROTEIN sequence
Length: 246
MTMPVPDLKRRLRLAAALLGASAALGACTHTNQETVTGSIPGDYRQRHPIVIQEANRATEVFVGSGRGGLTGAQRSDIAGLAEAWLREGTGAIVIDMPVNTPNARVASDSLREIRAILSAIGVPPHGITVRNYRPSDPRLFATIRVNYPRITADAGPCGTWPEDIGPSIKNKSYLENKQYYNFGCASQRNLAAVVANPSDLVQPRQETPPYGARRVVVLDKYRKGEGSATVYPDDQKNKISNVGQ*