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SCNpilot_expt_1000_bf_scaffold_1662_curated_21

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(22026..23441)

Top 3 Functional Annotations

Value Algorithm Source
Glycolate oxidase, subunit GlcD n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAC4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 469.0
  • Bit_score: 866
  • Evalue 1.70e-248
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EKS36565.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 469.0
  • Bit_score: 866
  • Evalue 2.30e-248
D-lactate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 462.0
  • Bit_score: 768
  • Evalue 1.10e-219

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
GTGGCCTTTTCCAACGCAGCTTTGACACGTCCGGCGCACAGCGCTGTTTCCAGCGCCCTTGAAGCGCTGGCCGCGCGGTTCGGCAACAATCTGATCACCTCGCAGGCGGTGCGCGAACAGCACGCCCATACCACCACCTGGCTGCCGCCGCAGGCACCCGACGCCGTGGTGATGGCGCGGACCACGGCCGATATTCAGGACGTGGTGCGGATCTGCGCCGAGCGCCGCGTTCCGGTGATCCCGTTCGGCACCGGCACGTCGCTGGAGGGGCAGGTCAATGCGCCGGCCGGCGGCATCTGTATCGACCTGCGCGAGATGAACAACATCATCGCCGTCCATCCCGACGATCTCGACTGCGTGATCGAGCCCGGCGTGACGCGCAAGGCGCTCAACGAACATCTGCGCGATCAGGGCCTGTTTTTCCCGATCGATCCCGGCGCGGACGCGTCCATCGGCGGCATGGCCTCGACCCGCGCCTCCGGTACCAACGCGGTGCGTTACGGCACGATGAAGGACAACATCCTCGCGCTGAAAGTGGTGCGCGCGGACGGCGAGATCATCACCACGGGCACGCGCGCGAAGAAGTCTTCGGCGGGTTACGATCTCACGCACCTGTTCATCGGCGCGGAAGGTACGCTCGGCATCATCTCGGAAATCACGCTCAAGCTGCGCGGCATCCCGCAAAGCATCGCCGCGGCCTCGTGCTCGTTCGCGACCGTGGAAGGGGCGTGCAACGCCACCATTCTCGCGATCCAGACCGGGATTCCGGTGGCGCGGATCGAGTTGTTGAATGCCGCGCAGGTGAAGGCCTGCAACGCCTATTCCAAGCTGTCGCTGCCTGAGACGCCGCTGCTGCTGCTGGAATTCCACGGCACCGAGGCCGATGTCGCCGAGCAGTCGAAGATGTTCGCCGAGATCGCGAAGGAGTGCGGCGGCGGCGCGTTCGAATGGACCACGCGGCAGGAAGACCGTACCCGTCTGTGGCAGGCGCGGCACGATGCCTACTGGGCAGTGCGCGGGCTTCGCCCCGGTGCGCAGGCGGTGGCGACGGACGTCTGCGTCCCGATTTCGCGGCTGGCGGAATGCGTGGTCGCAACCGAAGCCGATCTGGATGCCACGGACCTCCTGTCGCCGATCGTCGGCCATGTGGGCGACGGCAATTTCCATTGCTCCATGCTGGTGGACGTCAACGATCCCGACGAGATGGCCCGCGCGGACGGCTTCCTGCATCGCCTTGTGGAGCGGGCGCAGTCCATGGACGGCACCTGCACCGGCGAACACGGCATCGGGCAGGGCAAGCAGAAATATCTCGAAACCGAGCTCGGGCCGGAAGCGGTGCAGGCCATGCGTGCGTTGAAAGCCGCGCTTGACCCGCACAACATCCTCAACCCCGGCAAAATCCTGCCGCCGGCATGA
PROTEIN sequence
Length: 472
VAFSNAALTRPAHSAVSSALEALAARFGNNLITSQAVREQHAHTTTWLPPQAPDAVVMARTTADIQDVVRICAERRVPVIPFGTGTSLEGQVNAPAGGICIDLREMNNIIAVHPDDLDCVIEPGVTRKALNEHLRDQGLFFPIDPGADASIGGMASTRASGTNAVRYGTMKDNILALKVVRADGEIITTGTRAKKSSAGYDLTHLFIGAEGTLGIISEITLKLRGIPQSIAAASCSFATVEGACNATILAIQTGIPVARIELLNAAQVKACNAYSKLSLPETPLLLLEFHGTEADVAEQSKMFAEIAKECGGGAFEWTTRQEDRTRLWQARHDAYWAVRGLRPGAQAVATDVCVPISRLAECVVATEADLDATDLLSPIVGHVGDGNFHCSMLVDVNDPDEMARADGFLHRLVERAQSMDGTCTGEHGIGQGKQKYLETELGPEAVQAMRALKAALDPHNILNPGKILPPA*