ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1664_curated_1

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..393)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI00030FA1C7 similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 137.0
  • Bit_score: 215
  • Evalue 2.50e-53
Uncharacterized protein {ECO:0000313|EMBL:EKS41755.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 131.0
  • Bit_score: 213
  • Evalue 1.30e-52
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 130.0
  • Bit_score: 199
  • Evalue 5.90e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGAAAGCAGCTCTGAACAAGGCCGCAGCGTCAGTCAAAAATGCCGCGCCCCGGAAAAATGTGAAAGCGGCCAAGCAGTCCTATGTGCTGGATGACCAGATCGGTTTCGTCCTGCGTCAGGTCTGGCAGCGCCACGCGGCAATCTTCGCAAAGGAAATCGGCATCAACCTGACGCCGACGCAGTGGGCTGCGCTGGCGAAGCTCATCGAGACCGGACCCTGCTCGCAGAACCAGCTCGGGCGTCTCACCGCGATGGATGTCGCGACCATCAAGGGCGTGATTGATCGTCTCACCGTGCGTGGACTGACCGAAACGAGTTCCGACCCGCAGGACGGTCGCCGCCTTCTGGTCAGCCTGACCCGTGCCGGGCAATCGCTGGCCGCGAAAGTC
PROTEIN sequence
Length: 131
MAKAALNKAAASVKNAAPRKNVKAAKQSYVLDDQIGFVLRQVWQRHAAIFAKEIGINLTPTQWAALAKLIETGPCSQNQLGRLTAMDVATIKGVIDRLTVRGLTETSSDPQDGRRLLVSLTRAGQSLAAKV