ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3015_curated_1

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..543)

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase n=1 Tax=Afipia birgiae RepID=UPI0002E111D3 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 181.0
  • Bit_score: 296
  • Evalue 1.60e-77
Uncharacterized protein {ECO:0000313|EMBL:EKS39605.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 181.0
  • Bit_score: 294
  • Evalue 8.30e-77
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 182.0
  • Bit_score: 272
  • Evalue 1.30e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
TTGATCCCCTGGGAACTTCTGGATACCGCGCAGGTGCCGGGCGGCGGCGAACTTCGCCTGATGCGCAGGGGCGCCGAATTCTCCATCAAGCTCGGCCAGAATGAGTTGATGAACAGCCGTCTCAGCGGATCGGAGGAGGCGCTGGCGACGCTTGCCTGGAAGCGCGTTCAGCCACGAAACAAGCCGCGCATGCTGATCGGCGGACTGGGCATGGGGTTCACGCTGCGCGCCGCACTGGCCGTGCTCGGTCCCGATGCGCGGATCGTCGTATCCGAACTTGTGCCGAGTGTGGTGGCATGGGCGCGGGGGCCGATGGCGGAAATCTTTGGCAGCAGCCTGACGGATCCGCGCGTGACCATTCGCGAAATCGATGTCGGCCAACTGATCCGCGCCGAGCGTGCCGCTTACGACATCATCCTTCTGGATGTCGACAACGGTCCCGAAGGTCTGACGCGGGAAGCCAACGACGCGCTTTACAGTCAGTCGGGATTAGCCGCGGCTCATGCAGCGCTGCGGCCCGGTGGCGTGCTCGGCGTCTGGTCG
PROTEIN sequence
Length: 181
LIPWELLDTAQVPGGGELRLMRRGAEFSIKLGQNELMNSRLSGSEEALATLAWKRVQPRNKPRMLIGGLGMGFTLRAALAVLGPDARIVVSELVPSVVAWARGPMAEIFGSSLTDPRVTIREIDVGQLIRAERAAYDIILLDVDNGPEGLTREANDALYSQSGLAAAHAALRPGGVLGVWS