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SCNpilot_expt_1000_bf_scaffold_3015_curated_14

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 12651..13250

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L9 n=1 Tax=Afipia birgiae RepID=UPI000310093B similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 201.0
  • Bit_score: 361
  • Evalue 4.30e-97
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 201.0
  • Bit_score: 360
  • Evalue 1.80e-96
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 199.0
  • Bit_score: 318
  • Evalue 1.70e-84

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGACGTTATTCTGCTCGAACGCGTGGCCAAGCTCGGCCAGATGGGCGACGTGGTCAAAGTGAAGGACGGCTACGCCCGTAACTTCCTGCTCAAGCGCAACAAGGCCCTGCGCGCGACCAAGGAAAACCGCGAGAAGTACGACGGCATGAAGGCCGATCTCGAGGCCAAGAACATTCAGGCTAAGGGCGAAGCCACCAAGGTTGCCGAGAAGATCGACGGCCGCAACGTCGTCATCATCCGTCAGGCGTCGGAAACCGGCCAGCTTTACGGCTCGGTGTCGGTGCGTGACATCATGGCCGCGCTGGAGAAGGACGGCGTCTCGCTGAACCGTCAGCAGGTTCTGCTCGACGCGCCGATCAAGGCGATCGGCCAGCACCAGATCACCATCGCGGTGCATCCGGAAGTCGAAGTCCATGTCACCACCACGGTCGCCCGTTCCGAAGCGGAAGCCGAGCGCATCAATCGCGGTGAAGATGTCAACAGCCGTCAGGAAGACCGCGACGCCGCTGCCGAAGCGATCGCCGCCGCCGGCGAGTTCTTCGATCCGGAAGCCGACCACGACGAAGAGCCTGCTACGGCTCCTGCCGAAGAGAAGTAA
PROTEIN sequence
Length: 200
MDVILLERVAKLGQMGDVVKVKDGYARNFLLKRNKALRATKENREKYDGMKADLEAKNIQAKGEATKVAEKIDGRNVVIIRQASETGQLYGSVSVRDIMAALEKDGVSLNRQQVLLDAPIKAIGQHQITIAVHPEVEVHVTTTVARSEAEAERINRGEDVNSRQEDRDAAAEAIAAAGEFFDPEADHDEEPATAPAEEK*