ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1870_curated_4

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(2632..4011)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJ34_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 459.0
  • Bit_score: 848
  • Evalue 3.50e-243
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS38373.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 459.0
  • Bit_score: 848
  • Evalue 4.90e-243
response regulator receiver modulated diguanylate cyclase; K02488 two-component system, cell cycle response regulator similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 459.0
  • Bit_score: 794
  • Evalue 1.40e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTCCGCGCGCGTTCTGGTCGTTGACGATGTTCTCGCCAACGTAAAATTGCTTGAGGCGCGCCTGTCGGCGGAATACTTCGACGTGGTGACGGCGAACTGCGGAACGCAGGCGCTGGAAATCTGCGAGCGGGCCGAATGCGATATCGTCCTGCTTGACGTCATGATGCCGGACATCGACGGTTTTGAAGTCTGCCGCCGCCTGAAATCGAATCCCAAGACCCATTTCATTCCAGTCATTATGGTGACGGCGCTCGACAGCCCGTCCGACCGTGTGCGCGGCCTCGACGCCGGCGCCGACGATTTCCTCACCAAGCCGGTGTCGGACGTGGTGATGATCGCCCGCGTGCGGTCGCTGACGCGGCTGAAGATGATGACCGATGAATTGCGCATGCGCGCAATCACGTCGCTGGAGATCGGCGTCAATGCGCCCGAGCGCACCGCTGTGGCGGACGACGGGAAGGGCGGCCGCATCCTTCTTGTGGACGACCGGCCGTCATCCTATGAGCGGCTGGCTCCGGTGCTGGCCACCGAACACCATGTCGATGTTGAGCCAAATCCGGCGGAGGCCGTGTTTCATGCCGCCGAGGGCGATTACGATCTGTTGATCGTCTCGCTGGGCCTGGAGAATTTCGATGGGCTGCGGCTGTGCAGCCAGGCCCGCTCGCTGGAGCGGACCCGTAGCGTACCGATCCTCGCTATCGCAGATGCTGAGAACAATAACAGCGCGCGGTTGCTGCGCGGGCTGGAAATCGGCGTGAACGATTATCTGCTGCGCCCGGTGGACAAGAACGAACTGCTGGCGCGTGCGCGCACCCAGATCCGCAAGCGCCGCTATACCGATCATCTGCGCGACAATGTGCAGAACTCGATTGAAATGGCGATCACCGATCCGCTGACGGGATTGCACAACCGCCGCTATATGGAAAGCCATCTCGCGACGCTGGCCGAGCAGGCGTCGCTGCGCGCCAAGCCGCTGGCGCTGATGCTGCTGGACATCGACTACTTCAAGTCCATCAACGACACCTATGGTCACGACGCCGGCGACGACGTGCTGCGCGAATTTGCGATGCGCATTCGCAAGTCCATTCGCGGCATCGACCTCGCGTGCCGCTACGGCGGCGAGGAATTCGTTGTCGTGATGCCGGAGACCGATCTGCACGTGGCAGGCATGGTGGCCGAGCGTCTTCGCCGGTCCATCGCCGGCGAACCATTCGCCGTCGAGAAAGGCGCCAAGCGCATCGATGTCACGATCTCGATCGGAATCTCGACCCTTGAGACAAAGGGCGAGGCCATCGGCGATGTGCTCAAGCGGGCCGACCAGGCGCTGTATCGCGCCAAGAACGACGGCCGCAACCGGGTTGTGGCCGCCGCCGCGTAA
PROTEIN sequence
Length: 460
MSARVLVVDDVLANVKLLEARLSAEYFDVVTANCGTQALEICERAECDIVLLDVMMPDIDGFEVCRRLKSNPKTHFIPVIMVTALDSPSDRVRGLDAGADDFLTKPVSDVVMIARVRSLTRLKMMTDELRMRAITSLEIGVNAPERTAVADDGKGGRILLVDDRPSSYERLAPVLATEHHVDVEPNPAEAVFHAAEGDYDLLIVSLGLENFDGLRLCSQARSLERTRSVPILAIADAENNNSARLLRGLEIGVNDYLLRPVDKNELLARARTQIRKRRYTDHLRDNVQNSIEMAITDPLTGLHNRRYMESHLATLAEQASLRAKPLALMLLDIDYFKSINDTYGHDAGDDVLREFAMRIRKSIRGIDLACRYGGEEFVVVMPETDLHVAGMVAERLRRSIAGEPFAVEKGAKRIDVTISIGISTLETKGEAIGDVLKRADQALYRAKNDGRNRVVAAAA*