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SCNpilot_expt_1000_bf_scaffold_1870_curated_7

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 4812..6098

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 428.0
  • Bit_score: 754
  • Evalue 6.90e-215
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 417.0
  • Bit_score: 676
  • Evalue 4.10e-192
DNA polymerase IV n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA23_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 428.0
  • Bit_score: 754
  • Evalue 4.90e-215

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
TTGAGCGACCGTTCGCCGATCCACCTGGACGGGTTTTGCCGCGATTGCCTGGCGGATAGCAGGCCCGCGGTGAAGCGCTGTGCGGCGTGCGGCTCGCCACGCCTCGTGCGGCATCGATCGCTCGCATCGCTCAGCCTCGCTCACATCGATTGCGACGCCTTCTATGCCACCGTCGAAAAGCGGGACAATCCGGATATCGCCGACAAACCGGTGATCATTGGGGGCGGCAAGCGCGGCGTGGTGTCGGCGGCCTGCTACATCGCGCGGACCTATGGCGTGCGCTCCGCCATGCCGATGTTCAAGGCGCTCGATCTCTGCCCCTCCGCTGTCGTGGTGCGGCCCGACATGGCAAAATATGTCCGAGTCAGCCGCGAAGTCCGTCATGCCATGATGGCGCTGACACCGCTGGTCGAGCCGCTGTCCATCGACGAAGCGTTCCTCGATCTCAGCGGCACGACGCTGGTGCACGGCATGATCCCCGCCAAGGCGCTGGCCCGGTTCGCGGCGATGGTCGAACGCGACATCGGGATCACCGTGTCCGTCGGCCTGTCCGCGAACAAGTTTCTTGCCAAGATCGCCTCGGACCTCGACAAGCCGCGCGGCTTCGTCGTGCTCGATCAGGACGAGGCCCGCACGATGCTGGCCGACAGGCCGGTCGGCTTCATTTATGGCGTCGGCCCTGCCTCGCAGGAGAAACTGTCCCAGCGCGGTTACCGGCTGATCAAGGATCTGCAGCGCGCCGATGAAACCGACCTGATGAAGCAGTTCGGCGCCGAAGGCCGGCGGCTCTGGCGGCTGGCGCAGGGCATCGACGATCGCAAGGTGGTAGCGGACCGCGGCGCCAAGACGATTTCCAACGAGACCACTCTTGAGACGGACGTCCGGGATTTCGCCGCGCTGGAGAAAATCCTGTGGCGGCTGTGCGAGCGCGTATCGGCGCGGCTCAAGAGCAGCGACCTGTCAGGCTCGACCATCACATTGAAGCTCAAGACCGCTGATTTCCGCCAGCGCACTCGCTCGCAATCCATCGCCGTGCCGACGCAGCTTGCGACACGGATTTTCGGCACCGTCCGCGAGATGCTCAATCGCGAGATCGATGGCACCGCATTCCGGCTGATCGGGGCCGGCGTGAGCGCGCTCAAGCCCGGCGCCGAAGCCGACGATCAGGACCTGCTGGACCGCCGTTCAGCCCATGCCGAACGCGCGATGGACGACGTGCGCAAGAAGTTCGGCAATGCCGCCGTCATGCGCGGCATCTCTTATGAAGGGCCGCCGAAGACGGAGTGA
PROTEIN sequence
Length: 429
LSDRSPIHLDGFCRDCLADSRPAVKRCAACGSPRLVRHRSLASLSLAHIDCDAFYATVEKRDNPDIADKPVIIGGGKRGVVSAACYIARTYGVRSAMPMFKALDLCPSAVVVRPDMAKYVRVSREVRHAMMALTPLVEPLSIDEAFLDLSGTTLVHGMIPAKALARFAAMVERDIGITVSVGLSANKFLAKIASDLDKPRGFVVLDQDEARTMLADRPVGFIYGVGPASQEKLSQRGYRLIKDLQRADETDLMKQFGAEGRRLWRLAQGIDDRKVVADRGAKTISNETTLETDVRDFAALEKILWRLCERVSARLKSSDLSGSTITLKLKTADFRQRTRSQSIAVPTQLATRIFGTVREMLNREIDGTAFRLIGAGVSALKPGAEADDQDLLDRRSAHAERAMDDVRKKFGNAAVMRGISYEGPPKTE*