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SCNpilot_expt_1000_bf_scaffold_1266_curated_9

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 9192..10937

Top 3 Functional Annotations

Value Algorithm Source
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3ME36_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 580.0
  • Bit_score: 914
  • Evalue 3.90e-263
TRAP C4-dicarboxylate transport system permease subunit DctM similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 580.0
  • Bit_score: 914
  • Evalue 1.20e-263
Possible TRAP C4-dicarboxylate transport system permeaseDctM subunit {ECO:0000313|EMBL:ACP25705.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 580.0
  • Bit_score: 914
  • Evalue 5.40e-263

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1746
ATGAGCGATCCCGCACTCGGGCTGCTGATGCTCGGCCTTATCGTGATCGCGATCATGATGGGTTTCCCGACGGCCTTCACGCTGATGGGCCTCGGCGTTTTCTTCGGCTTCTACGCGTTTTACGTTCCGGGGGAGTACTGGTTCGACAACCGCGTCTTCGACCTGATGGTCCAGCGGACCTATGGCGCGATGACCAACGACGTCCTGATCGCGATTCCTTTGTTCGTGCTGATGGGTTACGTGATGGAGCGCGGAGCGCTCGTCGACAAGATGTTCTACGCGGTGCAACTCGTGTTCCGCCGCATCCCGGCGTCTCTCGCGGTGACAACGCTTGTCGTGTGCGCCTTCTGGGGAATGGCGACCGGTCTGGTCGGCGCGGTTGTCGTTTTGATGGGCGTCGTCGCGCTCCAGCCGATGCTGCGCGCCGGTTATGACGTCAAGCTCGCGGCCGGGGTGATCACTGCTGGCGGCACGCTCGGCATCCTGATCCCGCCGTCCATCATGATTATCGTCTATGCCGCCGTCGCAGGGCAGTCGGTGGTGAAGCTCTATGCGGCTGCCATGTTTCCCGGCCTTTTCCTGGCATTTCTGTATGTCTTGTATGTGATCGGCCGTGCCGTCATGAATCCGGCGATCGCGCCGCCGCTCACGGAGGAGGAGACCCGTATTCCGGTGCCGGACTGGATGCGCCGGTTTCAAGAGGCCTATTCTCCCAACATGGCGTCCGGTCTGGTCCGCTCCCTGCTGTCGCCGTCGAAGGCGGTTGCGATCGAGACGGAGAATGGGCCTCTCACCTACCGCCAGCTGCTTGCCAATACCGCCGTGATGCTGGTCCCGTTCGTGCTGACATCAGGCATTCTCGGGCTGCTCTGGTGGTATATCGTCATCCATCCACAAACCGGCGCTGAGAGCGCAGTGCAGGGAATTGAGCAGCTCGGCGCGCCGGTGGCCGACAGCGCCGATCCCGAAGCAGATGCGGGCGTTGCGACAAGTTTCTACATCACCTTCGCGGTCATGGCCGTGGTCGCGGCGGCGATGATCGTTCGCTACTATTGGCGCATGAGTGCCGAACGACTTCAGGTCGTGAAGCTGCTCAGTTCGTCGGTCATGCCGATGGCGCTTTTGATCGTCCTCGTGCTCGGTGCGATCCTGCTGGGGATCACGACCGCGACGGAATCGGCGGCGATCGGTGCGGCGGGCGCGCTCCTGCTTGCGTTGCAAGCGCGAACGCTGAGTTGGAAGCGCACCAAGGAAGCGGTGTTTCTGACCGCCAAGACCACATCGATGGTGTGCTGGCTGTTCGTCGGCTCGGCGCTGTTCTCGGCGGTGTTCGCCCTTCTCGGCGGTCAGAGTCTGATCGAACAGTGGGTGCTGTCGATGAACCTGACGCCGGTTCAGTTCATGATCCTGTCGCAGGTGATCATCTTCATTCTCGGCTGGCCGCTGGAATGGACCGAGATCATCATCATCTTCGTGCCGATCTTCCTACCGCTGCTGAAGCACTTCGGCATCGATCCGGTCCTGTGGGGCGTGCTGGTGTTCGTCAATCTGCAGGCGGCGTTCCTGTCGCCGCCGGTCGCCATGTCCGCCTTCTATTTGCGCGGCGTCGCGCCGGCACACGTCACCCTGAACAAGATTTTTGCCGGCATGATGCCGTACATGCTGATTGTCATTATCTGCATGATCCTGATGTATCTGTGGCCGGGCATGACCTTGTGGCTGCCGAACTATCTCTATGGAAGCTGA
PROTEIN sequence
Length: 582
MSDPALGLLMLGLIVIAIMMGFPTAFTLMGLGVFFGFYAFYVPGEYWFDNRVFDLMVQRTYGAMTNDVLIAIPLFVLMGYVMERGALVDKMFYAVQLVFRRIPASLAVTTLVVCAFWGMATGLVGAVVVLMGVVALQPMLRAGYDVKLAAGVITAGGTLGILIPPSIMIIVYAAVAGQSVVKLYAAAMFPGLFLAFLYVLYVIGRAVMNPAIAPPLTEEETRIPVPDWMRRFQEAYSPNMASGLVRSLLSPSKAVAIETENGPLTYRQLLANTAVMLVPFVLTSGILGLLWWYIVIHPQTGAESAVQGIEQLGAPVADSADPEADAGVATSFYITFAVMAVVAAAMIVRYYWRMSAERLQVVKLLSSSVMPMALLIVLVLGAILLGITTATESAAIGAAGALLLALQARTLSWKRTKEAVFLTAKTTSMVCWLFVGSALFSAVFALLGGQSLIEQWVLSMNLTPVQFMILSQVIIFILGWPLEWTEIIIIFVPIFLPLLKHFGIDPVLWGVLVFVNLQAAFLSPPVAMSAFYLRGVAPAHVTLNKIFAGMMPYMLIVIICMILMYLWPGMTLWLPNYLYGS*