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SCNpilot_expt_1000_bf_scaffold_1714_curated_4

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(3884..4816)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000366BA68 similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 298.0
  • Bit_score: 405
  • Evalue 5.30e-110
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 295.0
  • Bit_score: 310
  • Evalue 5.60e-82
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD86424.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 295.0
  • Bit_score: 310
  • Evalue 2.50e-81

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGCAGCAAAAATCAGCGTTGAGAAGGGGCGGAGATCTTCCGACCAAGACCGATCTCAACGCCCTGATCCTGTTTTATGAAGTGGCCAACATGCGCAGCATTTCGGCCACCGCGGCCAAGCTGGGCCTGCCGAAGTCGACCGTCAGCCGGAAGATTTCTGTTCTGGAGCATCAGGTCGGCGCCACGCTTCTGCGCCGCGGCACGCGCAATTCGTCGCTCACCGAAATCGGCTATGTCATCTACAACCACGCGCAACGGATCGTAGCGGAGCTGGAAGACGCCGGCTTTCAGGCGACGCAGATGCAGTCGAAGCTGAGCGGTGTGTTGCGCATCAGCCTACCTGTCGACTTCGGCATTTCCTGGCTGAGCCGTCTGGTCGCGGATTTCTCGCGCCACCATCCGGAAATGCGTCTGGTTCTCGATATCAACAATCGCTGGGTCGATGTTGCGGAAGAGCCTTACGACATCGCGATTCATCTCACGGTGCCGCGCAACACCAGCCTTCCGGTTCGCAAGTTTTCGTCGCTGTCGCGGGGCATTTACGCTTCGCCCGAGTATATGGCGCAGGTCGATAAACCTCGCACGATGGACGACTTGTTTCATCTCGATGTGATCATGACCACGCATCAGGCTGAGGAGGGTGTCTGGAATCTCGGCCGCTCAGACGCGCAGCGCGCAAACCTGGAGCCACGTGTTCTGGTCAACAACATCGGCATGGCGCGTGAAATGGTGACGGCCGGCATGGGTGTCGGCATCCTGCCGAACGTGATGTGCCGGAACGATGTCACCACGGGGCGTCTCGTTCGATTGTTCGAGGAGTGGGAAAGCCCGCGCTTGCAGGCTCACGCGACATATCTCGGACGCCGCAGAGTGCAGCGAAAAACCCAAGTTTTTATGGACTTTCTGTCCAGTTACCTTCTCACGGACAACTGA
PROTEIN sequence
Length: 311
MQQKSALRRGGDLPTKTDLNALILFYEVANMRSISATAAKLGLPKSTVSRKISVLEHQVGATLLRRGTRNSSLTEIGYVIYNHAQRIVAELEDAGFQATQMQSKLSGVLRISLPVDFGISWLSRLVADFSRHHPEMRLVLDINNRWVDVAEEPYDIAIHLTVPRNTSLPVRKFSSLSRGIYASPEYMAQVDKPRTMDDLFHLDVIMTTHQAEEGVWNLGRSDAQRANLEPRVLVNNIGMAREMVTAGMGVGILPNVMCRNDVTTGRLVRLFEEWESPRLQAHATYLGRRRVQRKTQVFMDFLSSYLLTDN*