ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1714_curated_20

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(21196..21453)

Top 3 Functional Annotations

Value Algorithm Source
ferredoxin, 2fe-2s fdii electron transport iron-sulfur protein n=1 Tax=Oceanicola sp. S124 RepID=UPI00025578A8 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 84.0
  • Bit_score: 103
  • Evalue 9.20e-20
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:CDP54103.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 85.0
  • Bit_score: 102
  • Evalue 2.20e-19
thcC; rhodocoxin; K04755 ferredoxin, 2Fe-2S similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 85.0
  • Bit_score: 94
  • Evalue 1.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGCATGGGGCTTTGTCCGCGGGACTTGATGGAATTGTCGGCGAGTGCGGTGGATCGGCGATGTGTGCCACCTGCCATGTCTATATCGCAAATGAAGAGCAGGCGAAGAGAGCGCTTCCACCGGTAAGCGCGGTCGAAGATGCGATGCTCGATTCTGCTGCTGCCGAACGTACTGTCGAAAGCCGTCTCGGGTGTCAGCTTTCCGTGACGGATGCATTCGACGGACTTGAGATCAAACTCCCGGAGAGGCAGTTGTGA
PROTEIN sequence
Length: 86
MHGALSAGLDGIVGECGGSAMCATCHVYIANEEQAKRALPPVSAVEDAMLDSAAAERTVESRLGCQLSVTDAFDGLEIKLPERQL*