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SCNpilot_expt_1000_bf_scaffold_1714_curated_22

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(22899..23612)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter n=1 Tax=Afipia birgiae RepID=UPI00036F9B13 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 237.0
  • Bit_score: 353
  • Evalue 1.80e-94
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KIZ40064.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 237.0
  • Bit_score: 355
  • Evalue 6.80e-95
branched-chain amino acid ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 238.0
  • Bit_score: 329
  • Evalue 8.90e-88

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCCCGCCGCACGGCTTGATGTCGAAAGTCTGAGCGCCGGCTACGGGCCCACGCGGATTATCCAAGGGCTCTCGTTTAATGTTGAGGCGGGAGAGCGGTTGGCGATCCTTGGCCGCAATGGGATGGGAAAGACGACACTGCTGGCCACGCTGATGGGCTTGTCCACACGCCATCACGGAAGCGTCAAGGTCGACGACATCGACGTGACGGCTCGCCGCACATCGGCGCGCGCTCATCTCGGCGTCGGCTATGTCCCGCAAACACGCGATATCTTTCGCTCGTTGACGGTCGAGGAAAATCTTTCGACAGGCCTGAAGGGGCGGCCGCGCGCGGCACTGGAAGAGGCCTACGTTATGTTTCCGCGGCTCGGCGAGCGGCGGCGGAATCTTGGCAGTCAGTTGTCGGGTGGCGAACAACAGATGCTGTCCATGGCCCGAACGCTTCTCGGTCGGCCGTCGATCCTGTTGCTCGACGAGCCTCTTGAAGGCCTTGCTCCGGTGATCTGCGATGAACTCATGACTATGATCACGGAATTGGCCGCATCCGGCAAGATGACGATTGTTCTGGTGGAACAGCAGATCGAGCGCGCGCTGGATTTTGCAGGCCGCGTGCTGATCCTGGAGCGCGGACGATTAGCCTGGCAGGGCGCATCCGGCGAATTGAAATCAGACCGCGCTCTGGTGGACCGTCTGCTCGGCGTGGGAATTCACTAA
PROTEIN sequence
Length: 238
MPAARLDVESLSAGYGPTRIIQGLSFNVEAGERLAILGRNGMGKTTLLATLMGLSTRHHGSVKVDDIDVTARRTSARAHLGVGYVPQTRDIFRSLTVEENLSTGLKGRPRAALEEAYVMFPRLGERRRNLGSQLSGGEQQMLSMARTLLGRPSILLLDEPLEGLAPVICDELMTMITELAASGKMTIVLVEQQIERALDFAGRVLILERGRLAWQGASGELKSDRALVDRLLGVGIH*