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SCNpilot_expt_1000_bf_scaffold_1714_curated_27

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(26424..27599)

Top 3 Functional Annotations

Value Algorithm Source
amino acid-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F60653 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 390.0
  • Bit_score: 639
  • Evalue 2.10e-180
Amino acid-binding protein {ECO:0000313|EMBL:KIZ40057.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 389.0
  • Bit_score: 650
  • Evalue 1.70e-183
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 386.0
  • Bit_score: 629
  • Evalue 6.90e-178

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGAAGAATTCAGCAAAGTTATTGATTGCGGTGGCGGCCCTCGGCATGATCGGCACGGCCGCGTCGGCGGATGTCATCAAGGTCGGCGTGATCGGGACCATGTCCGGGCCATTCGCGCTGTTCGGCACTAATTACAAGAGGGGGATCGAGGCATGGGTCGCCCAGCATGGCAACAAGGTCGGCAATCACGAGATTCAATTCATCTACCGCGATGAAGAATCTCCTAATCCGGCGAAGTCCAAGGCCTTGGCGCAGGAACTGATCGTCAAGGACAAGGTCCAGTATCTGGCGGGCGCCTATTTCACGCCCAACGCGATGGCCATCGCGCCGCTGCTGGAGGAATCGAAGACCCCGCTGGTCGTCATGAATGCCGCGACGTCGGCCATCGTCGAAAAGAGCCCGTACATCGTCCGCACGTCCTTCACGATGTGGCAGAACACCGTGCCTGCTGCTGAGATCGCGAAAAAGAACGGCGCGAAGAAAGTCGCGATCGCAGTGAGCGATTACGGTCCGGGTATCGATGCCGAGGCCGCGTTCAAAAAGACGTTCGAGGGCGGCGGCGGCACGGTGGCGGAAGCGATCCGCATGCCGCTGAACACCACGGATTTCAGCCCGATCATGCAGCGGATCAAGGACTCCGGCGCTGACACCATCTTCACGTTTCTGCCGGCCGGACCTCCGACGCTGGCCTTCGTCAAAGCCTATATCGACAACGGCCTGAAAGCCGCAGGCGTGAAGCTGATGTCGACCGGTGACGTCGTCACAGAGCCGGATCTTCCGAATATCGGTGATGCCGGCATCGGCATTCTCTCGACCTATCATTATGCCGTCTCCCATAATTCGCCCGAGAACAAGGCGTTTCTCGACCAGATGGTGAAGGATGGCGGAAAGCTCGGTGAGGTGACCATGACGTCGGTTGCGGCATATGATGGCGCACGCTTGATTTACAAGATGATCGAGGCGACAGACGGTCAGCGTGATCCAGCGAAGGCCATTGCCGCCGTCAAAGGCATGAAGTGGGTGAGCCCGCGCGGTCCGGTGTCGATCGATCCGGAGACGCGGCACATTCGGCAGAATGTCTATCTTCGCGAAGTCAAGAAGGTGGACGGCAAGCTCATCAATCAGGAAATCCAGACATTCGATGCACAGCCCGATTGGGCTCTGAGCAAGAACTAG
PROTEIN sequence
Length: 392
MKNSAKLLIAVAALGMIGTAASADVIKVGVIGTMSGPFALFGTNYKRGIEAWVAQHGNKVGNHEIQFIYRDEESPNPAKSKALAQELIVKDKVQYLAGAYFTPNAMAIAPLLEESKTPLVVMNAATSAIVEKSPYIVRTSFTMWQNTVPAAEIAKKNGAKKVAIAVSDYGPGIDAEAAFKKTFEGGGGTVAEAIRMPLNTTDFSPIMQRIKDSGADTIFTFLPAGPPTLAFVKAYIDNGLKAAGVKLMSTGDVVTEPDLPNIGDAGIGILSTYHYAVSHNSPENKAFLDQMVKDGGKLGEVTMTSVAAYDGARLIYKMIEATDGQRDPAKAIAAVKGMKWVSPRGPVSIDPETRHIRQNVYLREVKKVDGKLINQEIQTFDAQPDWALSKN*