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SCNpilot_expt_1000_bf_scaffold_1556_curated_20

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(21378..21779)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein SoxS n=1 Tax=Afipia birgiae RepID=UPI000371CFC5 similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 133.0
  • Bit_score: 188
  • Evalue 4.40e-45
Uncharacterized protein {ECO:0000313|EMBL:EKS42548.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 127.0
  • Bit_score: 185
  • Evalue 5.20e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 133.0
  • Bit_score: 161
  • Evalue 1.80e-37

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGTATGGCATGATCGCCGGAAAGCTAGCAAGAACCTTCGTGAGAATTGCGTTCGCGGCCTGCATGCTGTTGCCCTTCGCAGCCGCGCAGGCGTCCGAACTCGTGATGTTCGAACAGGCCGGATGCATTTACTGCCAGCGCTGGGACCGCAGCGTCGGCACGCTCTACGACAAGACCGACGAAGCGCGCCTGCTTCCGCTGCGGCGTGTCGACATTCGCGACCAGAAGATGAGCGGCGTCGTCCTCGCCTCGCCGGTGCGCTTCACGCCGACCTTCGTAGTGGTGGACAACGGCCGGGAGATCGGCCGCATCACCGGCTACAGCAATGACGATGCGTTCTGGGGATTGCTGGATACATTTGCCGCCAAACTCGCGCCCTCTTCTCAGGTCAACCGAACCTGA
PROTEIN sequence
Length: 134
MYGMIAGKLARTFVRIAFAACMLLPFAAAQASELVMFEQAGCIYCQRWDRSVGTLYDKTDEARLLPLRRVDIRDQKMSGVVLASPVRFTPTFVVVDNGREIGRITGYSNDDAFWGLLDTFAAKLAPSSQVNRT*