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SCNpilot_expt_1000_bf_scaffold_1556_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1556_curated_1
unknown

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2..76
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1556_curated_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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156..1484
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTU4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41758.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lipopolysaccharide biosynthesis
SCNpilot_expt_1000_bf_scaffold_1556_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1663..3297
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLX1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41759.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family
SCNpilot_expt_1000_bf_scaffold_1556_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3481..4653)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQH4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41760.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
patatin; K07001 NTE family protein
SCNpilot_expt_1000_bf_scaffold_1556_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4918..5700
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJP9_9BRAD
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EKS41761.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1556_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5715..6488
DNA (774bp) protein (258aa)
acetoacetate decarboxylase (EC:4.1.1.4); K01574 acetoacetate decarboxylase [EC:4.1.1.4]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGL6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41762.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_1556_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6602..7633
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PTU8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41763.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Mg2+ transporter protein, CorA-like; K16074 zinc transporter
SCNpilot_expt_1000_bf_scaffold_1556_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7645..9009
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLX6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41764.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
carbohydrate porin, OprB family; K07267 porin
SCNpilot_expt_1000_bf_scaffold_1556_curated_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9012..9797)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLS2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42536.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
enoyl-CoA hydratase/isomerase
SCNpilot_expt_1000_bf_scaffold_1556_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9825..10985)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJQ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41766.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1556_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10998..12056)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGL8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41767.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1556_curated_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12393..13823
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLS7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42541.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
aldehyde dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1556_curated_13
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14291..14929
DNA (639bp) protein (213aa)
Aldo/keto reductase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5MN77_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:EJT03690.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
aldo/keto reductase
SCNpilot_expt_1000_bf_scaffold_1556_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14963..17896)
DNA (2934bp) protein (978aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
bifunctional transaldolase/phosoglucose isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
phosoglucose isomerase n=1 Tax=Afipia birgiae RepID=UPI00030DCEF7
SCNpilot_expt_1000_bf_scaffold_1556_curated_15
unknown

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comp(17893..18423)
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1556_curated_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18636..19226
DNA (591bp) protein (197aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00031434A0
Uncharacterized protein {ECO:0000313|EMBL:EKS41771.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K07112
SCNpilot_expt_1000_bf_scaffold_1556_curated_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19303..19776
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKK9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08378.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein; K09004 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1556_curated_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19788..20897)
DNA (1110bp) protein (370aa)
lipocalin n=1 Tax=Afipia birgiae RepID=UPI0002DE7758
Uncharacterized protein {ECO:0000313|EMBL:EKS42546.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein; K07112
SCNpilot_expt_1000_bf_scaffold_1556_curated_19
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20972..21349)
DNA (378bp) protein (126aa)
Transcriptional regulator SoxR n=2 Tax=Bradyrhizobiaceae RepID=F7QKL1_9BRAD
Transcriptional regulator SoxR {ECO:0000313|EMBL:EGP08380.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1556_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21378..21779)
DNA (402bp) protein (134aa)
regulatory protein SoxS n=1 Tax=Afipia birgiae RepID=UPI000371CFC5
Uncharacterized protein {ECO:0000313|EMBL:EKS42548.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1556_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21820..22563
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJR1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41776.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c biogenesis protein, transmembrane region; K06196 cytochrome c-type biogenesis protein
SCNpilot_expt_1000_bf_scaffold_1556_curated_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22576..23163
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSN6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42550.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
thioredoxin-like protein
Displaying 22 items

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