ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2217_curated_5

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(4296..5033)

Top 3 Functional Annotations

Value Algorithm Source
cAMP-binding protein n=2 Tax=Rhizobium leguminosarum RepID=J0BFE9_RHILV similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 235.0
  • Bit_score: 217
  • Evalue 1.20e-53
CarD family transcriptional regulator {ECO:0000313|EMBL:KFG66501.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 231.0
  • Bit_score: 242
  • Evalue 5.10e-61
cyclic nucleotide-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 232.0
  • Bit_score: 209
  • Evalue 1.10e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCTGGAAGCACACGCGCGCGCCGGGATTCGCAACCGGCTGCTGCAAGCCATCGCGTTGGAAGACTGGGACTGGATCGGGCCGCATCTGGAGCCCGTCTCCATGAAGGAACGGCATGTCCTGGAAGTCTCGACCAAGCCGATCCCCCATGCCTGTTTCCTGGAAAGCGGTGTCGCCTCGGTGGTGGCGGTGGATGCCGAGGATCACCGCATCGAAGTCGGCGTGATCGGGTTTGAGGGCATGACCGGGGTGCCGCTGCTGCTGGGCGACAACCGCGCCCAGCATTCCACCTATATGCAGATCGCCGGCAGCGGCCATCGCATCGCCGCCGATGCCCTGTGCGGCGCCATCGGCAAAAGCGAACGCTTGCGCGCCTTGTTCCTGAAATGGACGCAAGGCTTCATGATCCAGACGGCGCATACCGCGCTGGCCAATGGCCGCGCCAAGCTGGAGCAGCGCCTGGCGCGCTGGCTGCTGATGGCGCATGACCGCATGACCACCGACACGGTGCCGCTGACCCACGAGTTCCTGGCGGTGATGCTGGGCGTGCGGCGGGCGGGTGTGACCGTGGCGATCCACAGTTTCGAACAGCGCGGCCTGGTCACCACCCGGCGCGGCCAGCTCACCCTGGTGAACCGGGCGGGCATCGAACAGGTGGCGGGCAGTTTTTACGGCACGCCGGAAGCGGAACTGAAGCGCCTGTTCGGCGACGCGACCGGCCGACGGGACGCCAAATAA
PROTEIN sequence
Length: 246
MLEAHARAGIRNRLLQAIALEDWDWIGPHLEPVSMKERHVLEVSTKPIPHACFLESGVASVVAVDAEDHRIEVGVIGFEGMTGVPLLLGDNRAQHSTYMQIAGSGHRIAADALCGAIGKSERLRALFLKWTQGFMIQTAHTALANGRAKLEQRLARWLLMAHDRMTTDTVPLTHEFLAVMLGVRRAGVTVAIHSFEQRGLVTTRRGQLTLVNRAGIEQVAGSFYGTPEAELKRLFGDATGRRDAK*