ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3704_curated_10

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(9618..11849)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 750.0
  • Bit_score: 992
  • Evalue 1.00e-286
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC84_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 735.0
  • Bit_score: 1198
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:EKS38334.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 735.0
  • Bit_score: 1198
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2232
TTGAATGATTCGCCACACAGGCCGCCCGTGACGCCATTTGCTCCTTCATCACCACGGTTCAGGCGCGGGAGCGCAGCGCTGGCTGGCGCGGTCGCTGGCCTGCTGCTGTCGAGCACCGTGTTCGCGGTCCCCCTGCCCAAACCCCGGCCGGTGTCCCGCAGCGTGACGCCGCACACCACTCCGGCAAAGCCGGGCCAGCACCCCACGCCCTCATCGGCCAAGGCATCGCCAATGGCCCCGGCCCAAAAGCCGACGGGCCAGGTGGCCACGCGGCCTACCGCGCCAAGAAAGCCGGCGGTATCGCTGGCCATGTCCACATCATCATCCACGCCGCGCGCCGACGCAGAGGTGGTCGAGCAGGTCATCGAGCTTCTGCGCGGCAAGAAATCCTCCGACGCGACGCAGCTTGCGGCCTCGATCGGCGATCCGGTCGCGCGCAAACTGGCGGAATGGGTCATCCTGCGCAGCGATGATAACGGTGCATCGTCCGAGCGATACAAGGCATTCCTCACCGAAAACCCCACTTGGCCGAGCCAGATCCTGCTTCGTCGACGCGGCGAAGGGGCCTTGTGGGACGACAAGCGCGACGACTCTGCTGTTCTCTCATTCTTTAATGGCGAGCAGCCGATCTCCGCCAAAGGACGCTTCGTTCTGGCGCGCGCCCTGCTCGCGCGGGGGGATCGCGCCACGGCGCAGCGGCTGGTGCGCGAAGCCTGGCACGGCGATTACTTCACCCGCGACACGGAAGAGACCGCATTCGAGCAGTTCGGTACGTTGCTCACCGCAGGTGACATCAAGACCCGCATGGAGATGCTGCTGTATTCGGGCGACAACGCCGAAGCGGCGATGCGCTCGGCGAAGCGGCTCGGCAGCGGTCATGTGGCACTGGCCAAAGCCCGGATCGCCCTCAACAAGAAGGCCTCGAACACAAAGGCCCTGCTCGATGCGGTGCCGGCCGATCTGCACAGCGATCCGCTCTATCTTTTCAGCCGGGCGCAGTGGTTCAGGCGCGAGGAAAAATTCGCGGAAGCCGCCCGTGCGATGCAGGCCGCGCCGCGCGAGGCTGCGCGCCTGGTCAATGCCGATGAATGGTGGATTGAACGGCGTTTGCTGGCGCGCAAGCTGCTCGACACCAACGAGCCGCGCACCGCTTACCTGATCGCACGCGATGCGCCGCTCCCCTCCCGCGACATCTACAAAACGGAGCGGGAATTCACCGCGGGCTGGATCGCGCTGCGCTTCCTCAACGATCCCAATCTCGCGGCCCAGCATTTCGCGCGCATCGGCGTCGGCAGCGTCAATCCGACGGCGCGGGCGCGCGCCGGTTACTGGCAGGGCCGCGCAGCGGAAGCCGCCGGACGCGCGCAGGAAGCCCGTGCTGCTTATGAATCCGCAGCCGCTCAATCGACCAGCTATTACGGCCAGCTTGCGCGGGCCAAGCTCGGCCTGCCGCAGATCGCGCTGAATGGAATCCCGGGACGCTCGCGCAACGGCGAACGGCTGGAAATCGTTCGTGCGGTGGATCTGCTCTATGCGCTCGACGAGCGCGAACTGGCCGTTCCGATCCTCGCAGATATGGGCGAACGCGCTGACATGGACGGCCTGCTCGCGCTCTGCGAACTGGCACAGCGGCATAACGATGCGCGCGGCATGCTGATGGTCGGCAAGGCGGCGCTCAATCGCGGGCTGCCGTTTGACCACTATGCTTATCCGGTCAGCGGCATTCCGCCCTACAAGGACTTCGGCCCCGAAGTTGAGAAAGCGATCGTCTTTGCCATTGCGCGGCAGGAAAGCGCGTTCAATCCCTCGGTCGTGTCTCCCGCCAACGCTTACGGCCTGATGCAGGTGACACCCGCCGCCGGCAAGTATGTCGCCAGGAAGTACGGCACGAGCTTCGATCTCGGCAGACTGAAGAACGATCCGGCCTACAACGCCGCGTTCGGCGCGGCCGAACTCGGCGGACTGATCGAGGACTATCGCGGCTCCTACATCATGACCTTCGCGGGTTACAATGCAGGCCGCGGCAGCGTCCGCAAATGGATCGAGCGTTATGGCGATCCGCGCGACCCGAAAGTGGATGCGGTCGACTGGGTGGAGAAGATTCCGTTCTCGGAGACCCGCAACTATGTTCAGCGCATCATGGAGAATTTGCAGGTCTACCGCGCGCGTTTCGGCGGCGGGTCGCGGCTGCTGATCGAAGCGGATTTGCGCCGCGGCGCGTCGGTGGAATAG
PROTEIN sequence
Length: 744
LNDSPHRPPVTPFAPSSPRFRRGSAALAGAVAGLLLSSTVFAVPLPKPRPVSRSVTPHTTPAKPGQHPTPSSAKASPMAPAQKPTGQVATRPTAPRKPAVSLAMSTSSSTPRADAEVVEQVIELLRGKKSSDATQLAASIGDPVARKLAEWVILRSDDNGASSERYKAFLTENPTWPSQILLRRRGEGALWDDKRDDSAVLSFFNGEQPISAKGRFVLARALLARGDRATAQRLVREAWHGDYFTRDTEETAFEQFGTLLTAGDIKTRMEMLLYSGDNAEAAMRSAKRLGSGHVALAKARIALNKKASNTKALLDAVPADLHSDPLYLFSRAQWFRREEKFAEAARAMQAAPREAARLVNADEWWIERRLLARKLLDTNEPRTAYLIARDAPLPSRDIYKTEREFTAGWIALRFLNDPNLAAQHFARIGVGSVNPTARARAGYWQGRAAEAAGRAQEARAAYESAAAQSTSYYGQLARAKLGLPQIALNGIPGRSRNGERLEIVRAVDLLYALDERELAVPILADMGERADMDGLLALCELAQRHNDARGMLMVGKAALNRGLPFDHYAYPVSGIPPYKDFGPEVEKAIVFAIARQESAFNPSVVSPANAYGLMQVTPAAGKYVARKYGTSFDLGRLKNDPAYNAAFGAAELGGLIEDYRGSYIMTFAGYNAGRGSVRKWIERYGDPRDPKVDAVDWVEKIPFSETRNYVQRIMENLQVYRARFGGGSRLLIEADLRRGASVE*