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SCNpilot_expt_1000_bf_scaffold_872_curated_19

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(21823..22062)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 78.0
  • Bit_score: 136
  • Evalue 3.70e-30
hemolysin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D34D1 similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 143
  • Evalue 9.70e-32
Hemolysin TlyA family protein {ECO:0000313|EMBL:EKS32123.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 79.0
  • Bit_score: 141
  • Evalue 5.20e-31

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GTGTTGCCGCTCGCCGCCGCGCCGATGCATCTCTTGGCGCTGATCAAGCCCCAATTCGAAGCCGACAGGAAGCATCTGAAGAAGGGCATCATCCGCGACGCGGCCGTGCATAAAGCGGCGTGCGACGACATCGCCGCCTTCGCCGCATCGCTCGGCTGCACCGACATCAAGGTCTTTCCGTCTTCCATTGCGGGCGGTGACGGCAATGTCGAATTCTTCATCGGCGCGCGACGCGGCTGA
PROTEIN sequence
Length: 80
VLPLAAAPMHLLALIKPQFEADRKHLKKGIIRDAAVHKAACDDIAAFAASLGCTDIKVFPSSIAGGDGNVEFFIGARRG*