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SCNpilot_expt_1000_bf_scaffold_2357_curated_10

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(9224..9694)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheW n=1 Tax=Afipia birgiae RepID=UPI00031C5463 similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 156.0
  • Bit_score: 282
  • Evalue 2.00e-73
Uncharacterized protein {ECO:0000313|EMBL:EKS36009.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 156.0
  • Bit_score: 288
  • Evalue 5.10e-75
CheW protein; K03408 purine-binding chemotaxis protein CheW similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 155.0
  • Bit_score: 257
  • Evalue 3.70e-66

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGGATGCAAATACCGAAAGCACGGATCAGGGCGTGACCGAATACGTGACGGCGATGATCGGCGGCCAGTTGTTCGGTCTTCCGATTGCGCGCGTGCAGGACGTCTTCATGCCAGAGCGCCTGACCCGCGTGCCGCTGGCGTCGAGCGAAGTCGCCGGCGTCCTCAATCTTCGCGGCCGCATCGTGACCGCGATCGACATGCGTGCACGGCTTGGCCTTGCCAAGAACGACGACGGCAGGCCGCCGATGGCGGTGGGCGTCGATCTTCGCGGCGAATCCTATGGACTGCTGATCGATCGCATCGGCGAAGTCCTGAAACTCGCGGACGACAGCCGCGAAGTGAATCCGGTCAATCTCGACCCGCGCATGGCGAAGATGGCGGGTGGCGTGCATCGCCTCGACGGACAACTCATGGTGGTCCTCGATGTGGATCGCGTGCTTGAGATCGCTCCGGACATGCTGGCTGCCTGA
PROTEIN sequence
Length: 157
MDANTESTDQGVTEYVTAMIGGQLFGLPIARVQDVFMPERLTRVPLASSEVAGVLNLRGRIVTAIDMRARLGLAKNDDGRPPMAVGVDLRGESYGLLIDRIGEVLKLADDSREVNPVNLDPRMAKMAGGVHRLDGQLMVVLDVDRVLEIAPDMLAA*