ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2357_curated_33

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(32368..33069)

Top 3 Functional Annotations

Value Algorithm Source
Hemolysin III family channel protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEM1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 233.0
  • Bit_score: 417
  • Evalue 7.80e-114
Hemolysin III family channel protein {ECO:0000313|EMBL:EKS36788.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 233.0
  • Bit_score: 417
  • Evalue 1.10e-113
Hly-III related proteins; K11068 hemolysin III similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 232.0
  • Bit_score: 352
  • Evalue 1.30e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGACGATCTTCCGCCTCAAGCAGCTCAGTTCGCACACCCGCGTCTCCGGCGGCGGCGTGGTCCGCTGGAATTACGACCGCGCGGAACTGATCGCGGACGGCGTGGTCCATGTGCTCGGCATCGCCGCCGGATTAATCGCCGCCACCGCGCTGATCGTGGTGGCTGCCGTCTATGCCACGCGCGCCGAGGTCATCTCGGTGTCGGTCTATGTGGCCGGCCTGCTGGCGATGCTCGGGCTGTCCGCGACGTACAATCTGTGGCCGGTCTCGCCGCTCAAGTGGGTGCTGCGCCGGTTCGATCACTCCGCGATCTACATCCTGATCGCTGCGACCTACACGCCGTTTCTGGCGCAGATGAACGACCGCTTCATGGCGACGGTTCTTTTGACCGGCGTGTGGTCCGTCGCGGCGATCGGCATCGCTCTCAAGATCTTCCTGCCCGGACGTTTCGATCGTCTCTCCATCGGGCTTTATCTCGCGCTCGGCTGGAGCGGCCTCGTCGCTTACGACAAGCTGGTGGCCTCGCTGCCGAGTTCGACGCTTTGGTTCATCGCCGCCGGCGGACTGATCTATTCGCTCGGCGTGATCTTCCATGCTTGGGAGCGGCTGCGCTTCCAGAACGCGATCTGGCATTCCTTCGTGCTGCTCGCTGCCGCGCTGCACTACACGGCGGTGCTTGATCTGGTGCTTGTCGCGGCGTGA
PROTEIN sequence
Length: 234
MTIFRLKQLSSHTRVSGGGVVRWNYDRAELIADGVVHVLGIAAGLIAATALIVVAAVYATRAEVISVSVYVAGLLAMLGLSATYNLWPVSPLKWVLRRFDHSAIYILIAATYTPFLAQMNDRFMATVLLTGVWSVAAIGIALKIFLPGRFDRLSIGLYLALGWSGLVAYDKLVASLPSSTLWFIAAGGLIYSLGVIFHAWERLRFQNAIWHSFVLLAAALHYTAVLDLVLVAA*