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SCNpilot_expt_1000_bf_scaffold_7020_curated_7

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 6031..6396

Top 3 Functional Annotations

Value Algorithm Source
potA3; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31); K11076 putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 1.80e-20
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 8.20e-20
Spermidine/putrescine ABC transporter ATP-binding subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JC30_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 104
  • Evalue 5.80e-20

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
GTGACCGCGATCCATCGCGATCTCGACCGCGTGGTGGTCACCACATCGCAAGCCGGCGTGACGGTGGCGGCACGTACCCAGGTTGTCAGCACCGGCGATGCAGTGTGCCTCGCGATCCGGCCTGAGAAGATCACGCTGACCGCAGGCGACGAGGCGGCGGGCGCAGGCGGCACCAATTCCTTCGCGGGCGTTCTGACGGACATCAACTATATCGGCGGCCTGTCGATGTATCGCGTCAGGCTCGACAGCGGCGCGATGCTCAAGGTGGCGCGGGCGAACGCGCGGCGGACGGGCGACCGGTTCGCATCGGGGCAGCGCGTCAGCCTGTCGTTTGCGCCGGAAGACGTCGTGGTGCTGGACCGATGA
PROTEIN sequence
Length: 122
VTAIHRDLDRVVVTTSQAGVTVAARTQVVSTGDAVCLAIRPEKITLTAGDEAAGAGGTNSFAGVLTDINYIGGLSMYRVRLDSGAMLKVARANARRTGDRFASGQRVSLSFAPEDVVVLDR*