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SCNpilot_expt_1000_bf_scaffold_1153_curated_18

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 18098..19414

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219N3_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 428.0
  • Bit_score: 301
  • Evalue 1.20e-78
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 428.0
  • Bit_score: 301
  • Evalue 3.70e-79
O-antigen polymerase {ECO:0000313|EMBL:ABD86903.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 428.0
  • Bit_score: 301
  • Evalue 1.60e-78

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGGGCCTGTTCGCTTTTGTCTGGCCCGACATGACCGATGCTGCATCCATTGTTCTTGTGGCTGGAACCATTTATGTCGCACTCCGTTGGCGCATAAATCTGCAGACGCCACCTTTCGTTCTGTCCTGCATCTGGATCGCGTTTATCGTGTTCGCGGCAATGTACGCGACATTAGAGAACTCTCCCGGCAATCAGTTCAGAAGTCTTGAAAAGCATCTTCCGATCGCGCTCGGGCCGATTGGAGCAATCGTTTTGACCGTAGCCTGTAATCGGCTGCGCATCAATCGTGACAGGCTTATCGTTCTGTTTCTTTCGGGGTTGATTGCCGGCGCGACACTCGTTCTCCTTTGCAATGGGATGCTCGATGTCCTGGCGCACGGAAATCCGGATGCCGGTGCGCTTGGCAAGCTCAATCGCAATTATGCGGCGCTGGCCTGCGGCATATCCCTCATCTCCATCGCGGCCCTCGTCGTGTTTTTGTCTGGGAGCGGCCGCATGCGCAAAAGATGGCGTGCGAGTGTGATCGTCATACTGGTATCAATCTTTTTGAGCGAGGGTATCTTGCTCGTCATGCTGGAAAGCCGAACGGGCTATGCGGCGACGGCGCTGGGCCTTGTGGTTTGGTGCGTCTTGACGCTGCGTGCGGGAGCGCGTGGCGCGAGTCGATCGCCTGGTCTCATCGTCGCGGCTGCGATTGTGGCCATAGCGACTTTCGGCGTCGCTTATTATTTTTCGCTGATCAGCAATCGTATCAGCGCGGACGGGTCGACCGCGGTCTATTTGAGGGAGTTGGCTGGGCTGGTGCAGGGGCATGCCATGGACAGCGCATCATTGTCGGCTGCTGGAAGCGAACGCCTGCAGCTTATCGCCGTTGCCCTTGATTTGATCCATCAGCGGCCGTGGCTGGGATGGGGACCAAACGCTTCGCAATTGGTCGCATTGTTTTCGCCCTATCCCGGCATTCGAAATCTTAACCAGTTTCACAACGGCTATCTGGAGTTTCTGGTGAGCTTCGGCGCCGGGGGAGGGGTTTTGATCGCCGCGCTTATTGGCGTGCTGATATGGTCTGCCTTCCGGCGCGGCCGCTCTGTTCAGCCGGATAATATCGCGCCGCCGTTGTTCGCCGCGATGATCGGGTTGATGGCTTACATCCTTGTCACCAACGTTACGGAGAGCGCCATCTTCGTGAAGCCGGTGGGGTTCATCTGCATGTTTGTTGCGGCGCTTGCCTGTATGAGGGACCGGGCGGCCACGGCCGATGTGATTGAGGGCCGGTTGACTGCGCAGGGACAAGACGAATCCCATATTTTGCGATAG
PROTEIN sequence
Length: 439
MGLFAFVWPDMTDAASIVLVAGTIYVALRWRINLQTPPFVLSCIWIAFIVFAAMYATLENSPGNQFRSLEKHLPIALGPIGAIVLTVACNRLRINRDRLIVLFLSGLIAGATLVLLCNGMLDVLAHGNPDAGALGKLNRNYAALACGISLISIAALVVFLSGSGRMRKRWRASVIVILVSIFLSEGILLVMLESRTGYAATALGLVVWCVLTLRAGARGASRSPGLIVAAAIVAIATFGVAYYFSLISNRISADGSTAVYLRELAGLVQGHAMDSASLSAAGSERLQLIAVALDLIHQRPWLGWGPNASQLVALFSPYPGIRNLNQFHNGYLEFLVSFGAGGGVLIAALIGVLIWSAFRRGRSVQPDNIAPPLFAAMIGLMAYILVTNVTESAIFVKPVGFICMFVAALACMRDRAATADVIEGRLTAQGQDESHILR*