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SCNpilot_expt_1000_bf_scaffold_2648_curated_16

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 13628..14890

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCK9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 421.0
  • Bit_score: 706
  • Evalue 1.20e-200
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERF82206.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 421.0
  • Bit_score: 706
  • Evalue 1.60e-200
Efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 417.0
  • Bit_score: 540
  • Evalue 5.90e-151

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
GTGTACTACCGCGACCCGGACGGGAAACCGAAATACTCGCCGGCGCCGGCGAAGACCGCTTCGGGCAAGGAATACTTACCCGTACGCAGCAGCGAGGACCTGAGCTTCGAGGAGGCGCCGCAGCCCGTGGCCGAGAAGGGTGCCGAGCCCAGACGCATCAAGTTCTACCGCAATCCTATGGGGCTTCCGGATACCTCGCCGGTCCCGAAGAAGGACTCGATGGGGATGGACTACCTGCCGGTCTACGACGGCGAGCAGGACGACGACGCCTCGGTGAAGGTCAGCGCGGGCAAGCTTCAGAAGGCGGGCGTGCGGACGGAAACGGCGGAGCTCCGCACGCTCAACACGATGGTCAGGGCGCCGGGGACGCTGCAGCAGGACGAGCGGCGCGTGTCGGTCGTGTCGCTCCGCTTCGAAGGATTCATCGACACCGTCGCGGACGTCACCACCGGCTCGCATGTCCGCAAGGGGCAGCCCCTGATGCGGATCTACGGGCCGAACCTGTCGAGCGCCGCCGCCGAATATCTGTCGGCGCTGAACGCCCGGAGCGACGTCGGCATCGGCGGCCAGGCGCTGAAGGGCGCGCGCCGCCGTCTCGAGAATCTCGGCGCGCCCGACGCCTTCATCGCGGACATCGAACGCACGCGGGAGATTCCCGTCTATCTGAATTGGCCCGCGCCTCAGGACGGCGAGATCGTGGACCGGACCGCCGTCAACGGCATGCGGGCCGCACCCGGCGACATCCTGTTCCGGATCGTCGACCGCGGTGTGGTGTGGGTGATGGTCGACGTCTCGGAGCGGGATCTGGCACTGCTGGAGGTTGGTCAGAAGGCCGTCGTGCGGCCCCGGGCCTATCCCGACCGGCGCTTCGCCGGAAAGGTGACGGTGATCTATCCGAACCTGAGACCCGAGACGCGCACCGCGCGGGTCAGGATCGAACTTCCCAATCCGGACGAGGTGCTGCGGCCGGACATGTACGCCGACGTGGAGATCGCCACTGGGACGGAAGCGCCCGTCGTGACCGTGTCGAGCAGCGCCGTCATCGACAGCGGCGAGCGCCAATTGGTGCTGCTGGACAAGGGGGAAGGCCGGTTCGAACCGCGCGCAGTCAGGCTCGGACGCCGCGGAGAAGGCCGGGTGGAGATTAAGGAGGGGCTTGCCGAACACGACAAGGTCGTCGTTTCCGCGAACTTCCTGATCGACGCCGAAAGCAACCTGAAGGCCGCACTCTCAGGCCTCGATACGGGAGAGAAAACGCAATGA
PROTEIN sequence
Length: 421
VYYRDPDGKPKYSPAPAKTASGKEYLPVRSSEDLSFEEAPQPVAEKGAEPRRIKFYRNPMGLPDTSPVPKKDSMGMDYLPVYDGEQDDDASVKVSAGKLQKAGVRTETAELRTLNTMVRAPGTLQQDERRVSVVSLRFEGFIDTVADVTTGSHVRKGQPLMRIYGPNLSSAAAEYLSALNARSDVGIGGQALKGARRRLENLGAPDAFIADIERTREIPVYLNWPAPQDGEIVDRTAVNGMRAAPGDILFRIVDRGVVWVMVDVSERDLALLEVGQKAVVRPRAYPDRRFAGKVTVIYPNLRPETRTARVRIELPNPDEVLRPDMYADVEIATGTEAPVVTVSSSAVIDSGERQLVLLDKGEGRFEPRAVRLGRRGEGRVEIKEGLAEHDKVVVSANFLIDAESNLKAALSGLDTGEKTQ*