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SCNpilot_expt_1000_bf_scaffold_2648_curated_25

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(22541..23149)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3IUU7_RHOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 189.0
  • Bit_score: 133
  • Evalue 2.50e-28
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 189.0
  • Bit_score: 133
  • Evalue 8.00e-29
Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence {ECO:0000313|EMBL:ABA81687.2}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 189.0
  • Bit_score: 133
  • Evalue 3.60e-28

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCCGAGCCCGCCGCAGCGCGCCGCATGGGAGAGGAGGGGGAACGCTTGCAACGCCAAGACCAGAAGGCCGTCCGATCCCGCCAGGAGGTGGAGGCCGCGATCTGCGGCCTCAGCACCGCCGAATGGGCGAGGATCGATTCCGTCGCGAGGTCGTTCTCGTTCGGGACGGGATGGGAGTCAGACGACCTGTCGCAGGAGGCCGTCTTCCGGACGTTGCGGGGCACCCGGAATTGTCCGGTGGAGGTCGATGTCGTGAAGCACCTGATCGACACCATGAGCAGCATCGCGGACGGAGAGAGGGAAAAGGCGCACAATCAGCTTGTGCATCTGCCCACCGTCCAGGCGGGGATCGAGGATGGGATCGACTCGCCCGCAGCGGAGTGGTCGGCGGAAGAGCAGAAGGCCTACGACGACGGGCGGAACGAAATCTTGGCGATTTTCGACGACGATACCGTGGCGCGCGATCTCGTCGAGGGTATCCTGGCCGAGTTCGATGCCGATCAGCTCAAGGAACTTACGGGACTGGACGGCACAGCCTATGCAACCAAGCGAACCCTGATACGGCGCAGACTTCTCAAACTCCGTCCCAAGGGATACCGGACATGA
PROTEIN sequence
Length: 203
MSEPAAARRMGEEGERLQRQDQKAVRSRQEVEAAICGLSTAEWARIDSVARSFSFGTGWESDDLSQEAVFRTLRGTRNCPVEVDVVKHLIDTMSSIADGEREKAHNQLVHLPTVQAGIEDGIDSPAAEWSAEEQKAYDDGRNEILAIFDDDTVARDLVEGILAEFDADQLKELTGLDGTAYATKRTLIRRRLLKLRPKGYRT*