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SCNpilot_expt_1000_bf_scaffold_6737_curated_7

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 5065..5400

Top 3 Functional Annotations

Value Algorithm Source
two-component hybrid sensor and regulator; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 111.0
  • Bit_score: 184
  • Evalue 2.20e-44
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P137_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 111.0
  • Bit_score: 207
  • Evalue 1.00e-50
PAS domain S-box protein {ECO:0000313|EMBL:EKS36292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 111.0
  • Bit_score: 207
  • Evalue 1.40e-50

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
TTGCGTTCGCTCAATGCGCGCGGCTTGCGTTCGCGTGGTTACACGGTGATCGAAGCTGAGAACGGGCTCGATGCACTGGAAGCGCTTGAGCGAGAGGATGGTGTCGTGGACCTCGTGGTGTCCGACGTGGTGATGCCGGAAATGGACGGCCCCACCATGCTCACCGAGATGCGCAAGACCAATCCCGATCTCAAGATCATCTTCGTGTCCGGCTATGCCGAAGATGCGTTTGAAAAGAGCCTGCCGGAAGGCCAGCAGTTCAACTTCCTGCCGAAGCCTTTCACGTTGAGCCAGCTTGTGGCGGCGGTGAAGGAAACCATGACGGCGGAGTCCTGA
PROTEIN sequence
Length: 112
LRSLNARGLRSRGYTVIEAENGLDALEALEREDGVVDLVVSDVVMPEMDGPTMLTEMRKTNPDLKIIFVSGYAEDAFEKSLPEGQQFNFLPKPFTLSQLVAAVKETMTAES*