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SCNpilot_expt_1000_bf_scaffold_6737_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6737_curated_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6737_curated_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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84..404
DNA (321bp) protein (107aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQ89_9BRAD
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
fliE; flagellar hook-basal body complex FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_expt_1000_bf_scaffold_6737_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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501..830
DNA (330bp) protein (110aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9N5_9BRAD
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EKS36295.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
fliQ; flagellar biosynthesis protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_expt_1000_bf_scaffold_6737_curated_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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893..1663
DNA (771bp) protein (257aa)
Flagellar biosynthetic protein FliR n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6E6_9BRAD
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
fliR; flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR
SCNpilot_expt_1000_bf_scaffold_6737_curated_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1673..2743
DNA (1071bp) protein (357aa)
flagellar biosynthesis protein FlhB n=1 Tax=Afipia birgiae RepID=UPI0002EE005C
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:EGP06647.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
flhB; flagellar biosynthesis protein FlhB; K02401 flagellar biosynthetic protein FlhB
SCNpilot_expt_1000_bf_scaffold_6737_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2861..5023
DNA (2163bp) protein (721aa)
multi-sensor hybrid histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P137_9BRAD
PAS domain S-box protein {ECO:0000313|EMBL:EKS36292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_6737_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5065..5400
DNA (336bp) protein (112aa)
two-component hybrid sensor and regulator; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
PAS domain S-box protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P137_9BRAD
PAS domain S-box protein {ECO:0000313|EMBL:EKS36292.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_6737_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5559..6506
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P493_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36291.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
import inner membrane translocase subunit Tim44
SCNpilot_expt_1000_bf_scaffold_6737_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7511..8080
DNA (570bp) protein (190aa)
glutathione S-transferase (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9N1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36290.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_6737_curated_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8155..8565
DNA (411bp) protein (137aa)
cupin n=1 Tax=Afipia birgiae RepID=UPI0003057F6B
Uncharacterized protein {ECO:0000313|EMBL:EKS36287.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cupin
SCNpilot_expt_1000_bf_scaffold_6737_curated_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8699..9040
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQ78_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP06639.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6737_curated_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9057..9476)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6D9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36284.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6737_curated_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10549..10803)
DNA (255bp) protein (85aa)
Virulence-associated protein I n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89QW3_BRADU
virulence-associated protein I
Virulence-associated protein I {ECO:0000313|EMBL:BAC48276.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_expt_1000_bf_scaffold_6737_curated_14
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10912..11538)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8Q4G3_BACAO
Tax=GWA2_Bacteroidetes_30_7_curated
SCNpilot_expt_1000_bf_scaffold_6737_curated_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11535..12044)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDQ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37710.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6737_curated_16
unknown

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comp(12412..12540)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6737_curated_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12804..13430
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PAB6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37709.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6737_curated_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13418..13948)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PH90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37708.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_6737_curated_19
unknown

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14892..14972
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 19 items

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