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SCNpilot_expt_1000_bf_scaffold_3537_curated_20

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 14027..15706

Top 3 Functional Annotations

Value Algorithm Source
poxB; pyruvate dehydrogenase (EC:1.2.2.2); K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1] similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 564.0
  • Bit_score: 641
  • Evalue 1.90e-181
Pyruvate dehydrogenase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0E9X4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 564.0
  • Bit_score: 650
  • Evalue 1.70e-183
Pyruvate dehydrogenase {ECO:0000313|EMBL:EOA02511.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 564.0
  • Bit_score: 650
  • Evalue 2.40e-183

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1680
ATGTCCAAAACCGTCGCCGAAACCCTTGTCGGAGTGCTTGAGGATATCGGCGTCACCCACATTTTCGGATTGATCGGAGACTCGCTCAATCCGCTGGGCGACGCCGTGCGCAAAAGCAAAATCGAATGGGTCGGCGTGCGCCACGAGGAAGGCGCGGCACTGGCCGCCACCGGACAGGCCAAGCTCACCGGCCGGCTCGGCGTCTGCGCCGGCACCACGGGCCCCGGCAGCACACATCTGGTCGCGGGCCTTTACGAAGCCGCCCGCGATCATGCGCCGGTGCTTGCGCTGTCCGGCGACATGATGCGCGCCATGCACGGCACCGAGTTCATCCAGACCACGACCCCGGACCTGCTGTTTCGCGACGTCTCGCTTTACACCGAAACCATCTCCGTGCCCGCGCAGGCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCGCTCATCTCACGCTGCCGCAGGATTTGCTGTCCGCCAAAGCCAGCGGCGCGGCGTCGAGCCTCGCCACGCTGCGGCCACGCACCGAGATCACCCCGGACGAGGACTCGATTTCCGCTGTCGCGCGCCGCATCGACCGAGCGGACAAGATCGTCGTCATGTGCGGCCACGGTTGCCGCGGCGCGGAGGATCTGCTGCGCGCCCTCTCCGACAAGCTGAAAGCGCCGCTGGTCCACACCTTCCGCGGCAAGGAGCTGATGGCCTATGACGATCCGCACTGGATTGGCGGTCTCGGCATGATCGGCACGCGGCCGTCCTACGACGCCGTGCAGGATTGCGACCTGCTGCTGATGGTCGGCACCGACTATCCCTATTCCAACTATCTGCCCGCGCACGGCAACGTCATCCAGATCGACGAACGCGCACAGGTGCTGGGCCGCCGCGCACCAACGGAATTGGGCGTGATCGGATCGGTTCGGCCTGCGCTGAAAAAGCTGCTCGACAAGGTTGCCGACAAGAGCGGCACGAAATTCCGGGACAAGGTGACGGCAGAGCGCAAACGCTGGGACGAAAAGCTTGCAAAGCAGGCTGACCTCACCCGCAGCAAGGACGTGATCCATCCGCAGGCGGTGGCGCGTACAGCGAGCGATCTCGCGAAGACCGACGCGATCTTCGTCACGGATACCGGCCTCAATACGCTGTGGTCCGCGAACTGGATTCGCCAGACCGGCCGCCAGCGCATCGTCGGGTCGTTCAACAACGCGGCTGTGGGCACGTCCGTCGGCATGGCCAACGGAATTCAGGCTCTCGACCGGTCAAGGCAGGTGATCGTGCTGACCGGCGATGGCGGCTTCAACATGCTGATGGGTGAGTTCATGACCGCCGTGCATCACAAGCTGCCGATCAAAGTCATCATCTACAACAATTCGGCGCTTGGCCTGATCAGGCTGGAAGCTGAAAGCGTCGGGCTTGCGCCCTTCAACGAGGCCATCGAGTTTCCCAATCCGGATTTCGCCGCGCTGGCGCGCGCCTGCGGCGGTCAGGGATTTGCGGCGAAGCTGCCGGGCGACCTCGAAGGCGCGATCCGCAGCGCGCTGGAAACCGATGGCCCGGCCATCGTCGACGCGGTTGTTTCCGCCGACGAGATGCCGAACGTCCCGCATCTCGAAGCCGAGATGGTCGGAAATTTCGCGCTGGCCAAGATCAAGGAAGCGGTTCTGGCTGTGACAGGGTGA
PROTEIN sequence
Length: 560
MSKTVAETLVGVLEDIGVTHIFGLIGDSLNPLGDAVRKSKIEWVGVRHEEGAALAATGQAKLTGRLGVCAGTTGPGSTHLVAGLYEAARDHAPVLALSGDMMRAMHGTEFIQTTTPDLLFRDVSLYTETISVPAQAPXXXXXXXXXXXVAHLTLPQDLLSAKASGAASSLATLRPRTEITPDEDSISAVARRIDRADKIVVMCGHGCRGAEDLLRALSDKLKAPLVHTFRGKELMAYDDPHWIGGLGMIGTRPSYDAVQDCDLLLMVGTDYPYSNYLPAHGNVIQIDERAQVLGRRAPTELGVIGSVRPALKKLLDKVADKSGTKFRDKVTAERKRWDEKLAKQADLTRSKDVIHPQAVARTASDLAKTDAIFVTDTGLNTLWSANWIRQTGRQRIVGSFNNAAVGTSVGMANGIQALDRSRQVIVLTGDGGFNMLMGEFMTAVHHKLPIKVIIYNNSALGLIRLEAESVGLAPFNEAIEFPNPDFAALARACGGQGFAAKLPGDLEGAIRSALETDGPAIVDAVVSADEMPNVPHLEAEMVGNFALAKIKEAVLAVTG*