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SCNpilot_expt_1000_bf_scaffold_459_curated_10

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(13005..13973)

Top 3 Functional Annotations

Value Algorithm Source
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 322.0
  • Bit_score: 592
  • Evalue 5.90e-167
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 322.0
  • Bit_score: 592
  • Evalue 2.60e-166
Malate dehydrogenase n=3 Tax=Oligotropha carboxidovorans RepID=F8BJ89_OLICM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 322.0
  • Bit_score: 592
  • Evalue 1.90e-166

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGGCGCGCAACAAAATTGCATTGATTGGCTCGGGTCAGATCGGCGGCACGCTCGCGCATCTGGTCGGGCTGAAAGAGCTCGGCGATGTGGTGATGTTCGACATCGCCGAAGGCATCCCGCAGGGCAAGTCGCTTGATATTGCTCAATCCTCGCCGATCAATGGTTTCGACGCCGCCTTCGCCGGCACCAATTCCTATGAGGGCCTCGCCGGCGCCGATGTCTGCATCGTCACGGCCGGCGTGCCGCGCAAGCCCGGCATGAGCCGCGACGATCTGCTTGGCATCAATCTCAAGGTGATGGAGCAGGTCGGCGCCGGCATCCGGAAGTATGCGCCCGATGCGTTCGTGATCTGCATCACCAACCCGCTCGACGCCATGGTCTGGGCGCTGCAGAAGTCCTCGGGCATGCCCGCCAGCAAGGTGGTCGGCATGGCCGGCGTGCTGGACTCGGCGCGCTTCCGCTATTTCCTCGCCGACGAGTTCAACGTCTCGGTCGAGGACGTCACCGCCTTCGTGCTCGGCGGCCACGGCGACAGCATGGTGCCGCTGGTGAAATACTCCACCGTGGCCGGCATCCCGCTGCCCGACCTGATCAAGATGGGCTGGACCTCGCAGGCTCGTCTCGACGAGATCGTCAACCGCACCCGCAATGGCGGCGCCGAGATCGTCAACCTGCTCAAGACCGGCTCGGCTTTCTACGCCCCGGCCGCCTCCGCGATCGCGATGGCCGAGAGCTATCTGCGCGACAAGAAGCGCGTGCTGCCCTGCGCCGCGCATCTCAACGGCGAATACGGCGTCAAGGACATGTATGTCGGCGTGCCGGTGGTGATTGGCGCCAAGGGCGTCGAGCGCATCGTCGAGATCGAATTGTCCGGCAAGGATCGCGAAGGCTTCGACAAGTCGGTCGCCGCGGTCCAGGGTCTGGTCGATGCCTGCAAGAAGATCGCGCCCGATCTGCTCGGCAAATAA
PROTEIN sequence
Length: 323
MARNKIALIGSGQIGGTLAHLVGLKELGDVVMFDIAEGIPQGKSLDIAQSSPINGFDAAFAGTNSYEGLAGADVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIRKYAPDAFVICITNPLDAMVWALQKSSGMPASKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDSMVPLVKYSTVAGIPLPDLIKMGWTSQARLDEIVNRTRNGGAEIVNLLKTGSAFYAPAASAIAMAESYLRDKKRVLPCAAHLNGEYGVKDMYVGVPVVIGAKGVERIVEIELSGKDREGFDKSVAAVQGLVDACKKIAPDLLGK*