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SCNpilot_expt_1000_bf_scaffold_1914_curated_24

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(21259..21993)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EE17D5 similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 219.0
  • Bit_score: 131
  • Evalue 1.20e-27
Uncharacterized protein {ECO:0000313|EMBL:EKS41334.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 216.0
  • Bit_score: 128
  • Evalue 1.80e-26

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGCGCGCTGTTATTTACCATCGCTTTCGCTCTTGCGAGCCTCTCGAATCCGAAAAATCAAAGCTCGAACAGTGGACGGCCGCCGCAAGTTGGACCGCCGATCATTCTGAAGCGGAGGTCGTGGCCGAGTTCAATGAAGATGAAAGCCAACTAGATGGTAGACCCGCCCTCCAAGCGGCGATTAATCTGTGTCAAAAGCTCAATGCGACCCTGATCATTGCGAGCACCGAGGCGATCGGCCATGGACCGCCGTTCTACCCGCGCATTGCGAGCGTCCCGGTTATTAAATTGCCTCCACCGGAGAGGCCTGTGGGTAATACCAAACCGGCGCCGCTCAACGCTCCGTCCGGATTATCGCTGTACTTCGACAATCACGCCGAGCAGCGGGTCGTTGACGTCTACCTTTGCAACGGGTCTGACCACCCGGTAACGAGCGTGGCGCTGCAGGTCGTCAATGCCTCGCTCGACTTCACCACCTGCACACTTCCAATCAACACCACGCCCCGCAAAGGGGTCTACGTCACCACCACCGAGACGAAGCATGTCAACCAACTGCCCGCAAAAACGGCCTGCTTGATTACGAACTACGATATCCTTATCGATGGCGACTTCCTTCTGATCAGCCAGATGCAATGGGTCATACCCAACGGCGCGATGGTGGCGGGGCGGGCAATTGTCGATAAGGGGCATAGCGCGAAAGGCTTCGTGCGATTCAGCATCGATAATAGTGCTTGA
PROTEIN sequence
Length: 245
MRAVIYHRFRSCEPLESEKSKLEQWTAAASWTADHSEAEVVAEFNEDESQLDGRPALQAAINLCQKLNATLIIASTEAIGHGPPFYPRIASVPVIKLPPPERPVGNTKPAPLNAPSGLSLYFDNHAEQRVVDVYLCNGSDHPVTSVALQVVNASLDFTTCTLPINTTPRKGVYVTTTETKHVNQLPAKTACLITNYDILIDGDFLLISQMQWVIPNGAMVAGRAIVDKGHSAKGFVRFSIDNSA*