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SCNpilot_expt_1000_bf_scaffold_454_curated_7

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 8019..11174

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6I8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 999.99
  • Bit_score: 1708
  • Evalue 0.0
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:EFI51935.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 999.99
  • Bit_score: 1708
  • Evalue 0.0
acrB; RND multidrug efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 999.99
  • Bit_score: 1701
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3156
ATGCCGAGTTTCTTTATCGATCGTCCCATCTTCGCGTGGGTGGTGGCGCTTTTCATCTGTCTGATCGGCGCGATTTCCATCCCGCTTCTGGCGGTGGCGCAGTATCCCATCATCGCGCCGCCGTCGATTTCGGTCAGCACGAGCTATCCCGGCGCCTCGCCGGAAAATCTCTACAACAGCGTGACACGGCTGATCGAGGAGGAGCTTAACGGCGCCTCCGGCATCCTGAATTTCGAATCCACCAGCGATTCGCTCGGACAGGTCGAAATCACCGCGAATTTCGTCCCCGGCACCGACACCAGCATGGCCTCGGTCGAGGTGCAGAACCGCCTCAAGCGTGTCGAAGCGCGGCTGCCGCGCGCGGTGATCCAGCAGGGCATTCTGGTGGAAGAAGCTTCCAGCGCGGTGCTTCAGATCATCACCTTGCGCTCCACCGACGGCAGCCTCGATGAGGTCGGCCTCGGCGATTTCATGGTGCGTAACATCGTCGGCGAGATCCGGCGCATTCCCGGCGTAGGCCGTGCGACGCTGTACTCGACCGAGCAGTCGCTGCGCGTCTGGATCGACCCCGAGAAACTTGTCGGCTTCAAGCTCACCGCCGACGACGTCACCAAGGCGATCAATGCGCAGAACGCTCAGGTGGCTTCCGGCAGCGTCGGCGCGGAGCCGAGCGCCAACGGCCAGAAGGTTTCCGCGCTGGTGCTGGTGAAGGGGCAACTCGGCTCGCCCGAAGAGTTCGGCGCCATCGTGCTGCGCGCCAATGCCGATGGTTCGACGGTGCGGCTGCGTGATGTCGCGCGCATCGAGATCGGCGGCATGGGCTATCAGTTCACCACGCGGCTGAATGGCAAGCCGACGGCCGGTCTCTCCGTGATGCTGGCGCCGACTGGAAATGCGCTGGCCACCGCGGGCGCGGTCGAAGCCAAGATGAAAGAACTCTCGAAGTTCTTCCCGGCCAACATCGCCTACGACATTCCCTACAACATCACGCCCGTGGTCGAGGCTTCGATCCACAAGGTGCTGATGACCCTGGTCGAGGCGGTGATCCTGGTGTTCGTCGTCATGTTCCTGTTCTTGCAGAACTTCCGCTACACCATCATTCCGACCATCGTTGTTCCGGTCGCGCTGCTGGGCGCGTGCTCTGCCCTGCTGCTGGCTGGCTACTCGATCAACATGCTGACCCTGTTCGCCATGGTGCTGGCGATCGGCATTCTGGTCGATGACGCCATCGTCGTGGTGGAAAACGTCGAACGCATCATGGCGGAGGAGGGGCTGCCGCCGAAGGAGGCGACGCGCAAGGCGATGTCGCAGATCACCAGTGCGATCGTCGGTATCACTCTGGTGCTGGTGGCGGTGTTCGTGCCGATGGCGTTCTTCCCCGGTTCGGTCGGCATCATCTATCGGCAGTTCTCGGTCACCATGGTCGCCGCGATTGCCTGCTCGGCGCTGATGGCGCTGTCGCTTACGCCGGCGCTGTGCGCCACGTTGCTCAAGCCGATCGATCCGGCGCATCATGAAGCGAAGAAGGGCGTGTTCGGCTGGTTCAACCGCATGCTCGATCGCACCCGCGACCGTTACACCACCACGGTCGGCTGGTCGCTCAAGCGCGCCGGCCGTCTCATGCTGATTTATGTCGCGCTGGTCGCGGGCCTTGGCTGGGCGTTCGTGCGGATGCCAGCGGGCTTCCTGCCGATCGACGATCAGGGCTTCATCACCACGGACGTGCAGACGCCGTCGGATTCGTCCTTTTCCCGCACCGAAGCCGTGGTGAAGAGCGTCGAGAAGTATCTGTCCGAGCGTTCCGGCGTCGGCGACGTCACCTTCCTCACCGGCTTCAGCTTCCTTGGTCAGGGCACCAATACGGCGCAGGCGTTCATCACGTTGAAGGACTGGTCCGAACGTGGCAAAGGCGACAGCGCCGCTTCCATCGTGGACGACGTCAACAAGAGCCTGTCGAATATCCGGGATGCTCGCATCACCGCACAGCAACCGCCGCCGATCGACAACCTCGGCAATTCCAGCGGTTTCTCCTTCCGCCTGCAGGACCGCGGCCAGAAGGGCTATCATGCTTTGATGCAGGCCGCGCAGCGTCTGGTGACCGACGCCAACGCCAGCCCGGTGCTGAAGAAGGTATTCATCGAAGGCTTGCCCGAGGCGCCGCAGGTCAATCTCGTGATCGATCGCGAGAAGGCGAGCGCGTTCGGCATCACCTTCGAGGAGATCAACAACACCATCTCGACCAATCTCGGTTCGAACTACGTCAACGATTTTCCGAATCGGGGCCGCATGCAGCGCGTGATCGTGCAGGCGGATTCCCATGACCGCATGAACGCCGAGGACATTCTCAACTACAATGTCCGGAACTCACGCGGCGGACTGGTGCCGTTCTCGTCGTTCGCGAGCGTGGAATGGATCAAGGGGCCGACCCAGATCGTCGGCTTCAATTATTATCCCACGGTGCGCATCAGCGGCGAGGCGCAGGCCGGCTACACCAGCGGCGATGCCATCGCCGAGATGGAGCGGCTGACAAAACTGTTGCCGCGCGGGTTCGGTTACGAGTGGACCGGCCAGTCGCTGCAGGAGAAGCTGTCCGGCTCGCAGGCCCCGTTCCTGCTGGCGCTGTCGGCGCTGGTGGTGTTTCTGTGCCTCGCGGCGCTCTATGAAAGCTGGACCATTCCGCTTGCGGTGCTGCTGACGATTCCGCTGGGCATTTTCGGCGCGGTGCTGGCCTCGATGCTACGCGGTTTGCCGAATGGCGTCTATTTCACGGTCGGTCTCATCACCATCATCGGTCTTGCGGCCAAGGATGCGATTCTCATCATCGAGTTCGCCAAGGATCTGCGCGCGCAAGGCAAGCCGCTGGTGGCGGCGACGCTGGAGGCTTGCCATCTGCGCTTCCGGCCGATCCTCATGACCGGTCTTGCCTTCGTCTGCGGCGTACTGCCGATGGTGGTGGCCACGGGTGCCGGCGGCCAGAGTCAGCAGGCGCTCGGCACCGGCGTGATGGGCGGCATGATCGCGGTGGTCATTCTGGCGCTCTTGATGGTGCCGGTGTTCTTCGTCTTCATTCAGCGGTTGTTCTCGCGAGCCAATCAAGACAAGGGCGAGACCGCGGACGCGGAAAATCCCGAGGCCTCCAAGTCTGCCACGTCATAG
PROTEIN sequence
Length: 1052
MPSFFIDRPIFAWVVALFICLIGAISIPLLAVAQYPIIAPPSISVSTSYPGASPENLYNSVTRLIEEELNGASGILNFESTSDSLGQVEITANFVPGTDTSMASVEVQNRLKRVEARLPRAVIQQGILVEEASSAVLQIITLRSTDGSLDEVGLGDFMVRNIVGEIRRIPGVGRATLYSTEQSLRVWIDPEKLVGFKLTADDVTKAINAQNAQVASGSVGAEPSANGQKVSALVLVKGQLGSPEEFGAIVLRANADGSTVRLRDVARIEIGGMGYQFTTRLNGKPTAGLSVMLAPTGNALATAGAVEAKMKELSKFFPANIAYDIPYNITPVVEASIHKVLMTLVEAVILVFVVMFLFLQNFRYTIIPTIVVPVALLGACSALLLAGYSINMLTLFAMVLAIGILVDDAIVVVENVERIMAEEGLPPKEATRKAMSQITSAIVGITLVLVAVFVPMAFFPGSVGIIYRQFSVTMVAAIACSALMALSLTPALCATLLKPIDPAHHEAKKGVFGWFNRMLDRTRDRYTTTVGWSLKRAGRLMLIYVALVAGLGWAFVRMPAGFLPIDDQGFITTDVQTPSDSSFSRTEAVVKSVEKYLSERSGVGDVTFLTGFSFLGQGTNTAQAFITLKDWSERGKGDSAASIVDDVNKSLSNIRDARITAQQPPPIDNLGNSSGFSFRLQDRGQKGYHALMQAAQRLVTDANASPVLKKVFIEGLPEAPQVNLVIDREKASAFGITFEEINNTISTNLGSNYVNDFPNRGRMQRVIVQADSHDRMNAEDILNYNVRNSRGGLVPFSSFASVEWIKGPTQIVGFNYYPTVRISGEAQAGYTSGDAIAEMERLTKLLPRGFGYEWTGQSLQEKLSGSQAPFLLALSALVVFLCLAALYESWTIPLAVLLTIPLGIFGAVLASMLRGLPNGVYFTVGLITIIGLAAKDAILIIEFAKDLRAQGKPLVAATLEACHLRFRPILMTGLAFVCGVLPMVVATGAGGQSQQALGTGVMGGMIAVVILALLMVPVFFVFIQRLFSRANQDKGETADAENPEASKSATS*