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SCNpilot_expt_1000_bf_scaffold_454_curated_31

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(36232..36657)

Top 3 Functional Annotations

Value Algorithm Source
Histidine triad (HIT) protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 141.0
  • Bit_score: 237
  • Evalue 1.10e-59
Histidine triad (HIT) protein {ECO:0000313|EMBL:EFI52523.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 141.0
  • Bit_score: 237
  • Evalue 1.60e-59
histidine triad; K02503 Hit-like protein involved in cell-cycle regulation similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 141.0
  • Bit_score: 235
  • Evalue 8.00e-60

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGGCCAAGTATGACGACCAGAATATTTTTGCGAAAATCCTGCGCGGCGAACTGCCGGCCTACAAGGTCTACGAGGACGACAAGACCTTCGCCTTCATGGACATCATGCCCCGCTCGGCCGGGCATGCGCTGGTCATTCCCAAGGCGCCGGCGCGCAACCTGCTCGATATCGCGCCGGACGATTTCGCCGCGGTGGCCCGCACCGCCAAGACCATCGCGATCGCCGCGATGAAGGCCTTTGCCGCCGACGGAATCATCGTCCAGCAGTTCAGCGAGCCGGCCAGCGGTCAGGTCGTGTTCCACCTGCACATGCATGTGATGCCGTGCAAGGAAGGCGTCGCGTTGCTGCCGCCGCAGAGCCGCAAGGAAGACCCCAAGGTTCTGGAAGATCACGCCGCCAGGTTGATCGCCGCGCTCAAGGGCTGA
PROTEIN sequence
Length: 142
MAKYDDQNIFAKILRGELPAYKVYEDDKTFAFMDIMPRSAGHALVIPKAPARNLLDIAPDDFAAVARTAKTIAIAAMKAFAADGIIVQQFSEPASGQVVFHLHMHVMPCKEGVALLPPQSRKEDPKVLEDHAARLIAALKG*