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SCNpilot_expt_300_bf_scaffold_534_curated

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_300_bf_scaffold_534_curated_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..604)
DNA (603bp) protein (201aa)
Chromate transporter n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AM2_POLSJ
Chromate transporter {ECO:0000313|EMBL:GAO22722.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
chromate transporter; K07240 chromate transporter
SCNpilot_expt_300_bf_scaffold_534_curated_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(629..1591)
DNA (963bp) protein (321aa)
Chromate resistance exported protein n=3 Tax=Burkholderiales RepID=F4G777_ALIDK
Chromate resistance protein {ECO:0000313|EMBL:GAO22721.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
chromate resistance exported protein
SCNpilot_expt_300_bf_scaffold_534_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1748..2233
DNA (486bp) protein (162aa)
Transposase IS3/IS911 family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TS10_ALIDB
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AEB83096.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_4
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2230..2562
DNA (333bp) protein (111aa)
IS66 Orf2 family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TS09_ALIDB
Transposase {ECO:0000313|EMBL:KJA10783.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
IS66 Orf2 family protein
SCNpilot_expt_300_bf_scaffold_534_curated_5
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2645..3715
DNA (1071bp) protein (357aa)
Transposase IS66 n=2 Tax=Alicycliphilus denitrificans RepID=E8TS08_ALIDB
Transposase {ECO:0000313|EMBL:KJA10785.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
transposase IS66
SCNpilot_expt_300_bf_scaffold_534_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5180..8071
DNA (2892bp) protein (964aa)
Transposase Tn3 family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W704_ACISJ
Transposase, Tn3 family protein 2 {ECO:0000313|EMBL:GAO22062.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
transposase Tn3 family protein
SCNpilot_expt_300_bf_scaffold_534_curated_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8068..8415
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W703_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:GAO22061.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_expt_300_bf_scaffold_534_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8460..8747)
DNA (288bp) protein (96aa)
Methyltransferase type 11 n=2 Tax=Alicycliphilus denitrificans RepID=E8U1R0_ALIDB
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADV00049.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_534_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8974..10293
DNA (1320bp) protein (440aa)
histidinol dehydrogenase (EC:1.1.1.23); K15509 sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Histidinol dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDA6_ALIDK
SCNpilot_expt_300_bf_scaffold_534_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10296..11057
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1Q8_ALIDB
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV00047.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_534_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11054..12094
DNA (1041bp) protein (347aa)
Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q7_ALIDB
lacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEB84863.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12091..13101
DNA (1011bp) protein (337aa)
Putative secreted protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q6_ALIDB
secreted protein
Putative secreted protein {ECO:0000313|EMBL:ADV00045.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_534_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13126..14142
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q5_ALIDB
extra-cytoplasmic solute receptor family protein
Extra-cytoplasmic solute receptor family protein 99 {ECO:0000313|EMBL:AEB84861.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14152..14850
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q4_ALIDB
Dimethylmenaquinone methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:ADV00043.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_300_bf_scaffold_534_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14886..15671
DNA (786bp) protein (262aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:AEB84859.1}; EC=4.1.3.39 {ECO:0000313|EMBL:AEB84859.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
HpcH/HpaI aldolase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q3_ALIDB
SCNpilot_expt_300_bf_scaffold_534_curated_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16032..16985)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZZ8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83576.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17486..18343
DNA (858bp) protein (286aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.99.10); K04118 pimeloyl-CoA dehydrogenase [EC:1.3.1.62]
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB83575.1}; EC=1.3.99.10 {ECO:0000313|EMBL:AEB83575.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Isovaleryl-CoA dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC01_ALIDK
SCNpilot_expt_300_bf_scaffold_534_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18352..19467
DNA (1116bp) protein (372aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC00_ALIDK
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEB83574.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19670..20602)
DNA (933bp) protein (311aa)
Electron transfer flavoprotein alpha subunit n=2 Tax=Comamonadaceae RepID=E8U001_ALIDB
electron transfer flavoprotein alpha subunit; K03522 electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:GAO24593.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_534_curated_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20604..21359)
DNA (756bp) protein (252aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U002_ALIDB
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
Electron transfer flavoprotein subunits alpha/beta {ECO:0000313|EMBL:GAO24594.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_534_curated_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21403..22380)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U003_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24595.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_534_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22397..23581)
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEB83570.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AEB83570.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acetyl-CoA acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB79_ALIDK
SCNpilot_expt_300_bf_scaffold_534_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23596..23997)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U005_ALIDB
hypothetical protein; K07068
Uncharacterized protein {ECO:0000313|EMBL:AEB83569.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24000..25130)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U006_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24598.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_534_curated_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25133..25909)
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8U007_ALIDB
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEB83567.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_300_bf_scaffold_534_curated_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25926..27092)
DNA (1167bp) protein (389aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB83566.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB83566.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U008_ALIDB
SCNpilot_expt_300_bf_scaffold_534_curated_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27262..29385
DNA (2124bp) protein (708aa)
CoA-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U009_ALIDB
CoA-binding domain-containing protein
CoA-binding domain-containing protein {ECO:0000313|EMBL:GAO24601.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_534_curated_28
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29382..29786
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U010_ALIDB
hypothetical protein; K07068
Uncharacterized protein {ECO:0000313|EMBL:GAO24602.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_300_bf_scaffold_534_curated_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29783..30946
DNA (1164bp) protein (388aa)
Thiolase, C-terminal domain-containing protein 10 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB72_ALIDK
Thiolase {ECO:0000313|EMBL:GAO24603.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
thiolase, C-terminal domain-containing protein 10
SCNpilot_expt_300_bf_scaffold_534_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30967..31692)
DNA (726bp) protein (242aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8U012_ALIDB
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADV01011.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying items 1-30 of 49 in total

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